Evidence map›Paper›PMID 37108502›Full record

ArticleInternational journal of molecular sciences2023

Identification of Signature Genes of Dilated Cardiomyopathy Using Integrated Bioinformatics Analysis.

Zhimin Wu, Xu Wang, Hao Liang, Fangfang Liu, Yingxuan Li, Huaxing Zhang, Chunying Wang, Qiao Wang

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Zhimin WuDepartment of Pharmacy, Hebei Medical University, Shijiazhuang 050017, China.
Xu WangDepartment of Pharmacy, Hebei Medical University, Shijiazhuang 050017, China.
Hao LiangDepartment of Pharmacy, Hebei Medical University, Shijiazhuang 050017, China.
Fangfang LiuDepartment of Pharmacy, Hebei Medical University, Shijiazhuang 050017, China.
Yingxuan LiDepartment of Pharmacy, Hebei Medical University, Shijiazhuang 050017, China.
Huaxing ZhangCore Facilities and Centers, Hebei Medical University, Shijiazhuang 050017, China.
Chunying WangDepartment of Pharmacy, Hebei Medical University, Shijiazhuang 050017, China.
Qiao WangDepartment of Pharmacy, Hebei Medical University, Shijiazhuang 050017, China.
Hebei Medical University · CN

Funding

Natural Science Foundation of Hebei Province No. H2020206404Natural Science Foundation of Hebei Province No. H2020206629Natural Science Foundation of Hebei Province No. H2021206181
6 · The paper itself

Abstract

Dilated cardiomyopathy (DCM) is characterized by left ventricular or biventricular enlargement with systolic dysfunction. To date, the underlying molecular mechanisms of dilated cardiomyopathy pathogenesis have not been fully elucidated, although some insights have been presented. In this study, we combined public database resources and a doxorubicin-induced DCM mouse model to explore the significant genes of DCM in full depth. We first retrieved six DCM-related microarray datasets from the GEO database using several keywords. Then we used the "LIMMA" (linear model for microarray data) R package to filter each microarray for differentially expressed genes (DEGs). Robust rank aggregation (RRA), an extremely robust rank aggregation method based on sequential statistics, was then used to integrate the results of the six microarray datasets to filter out the reliable differential genes. To further improve the reliability of our results, we established a doxorubicin-induced DCM model in C57BL/6N mice, using the "DESeq2" software package to identify DEGs in the sequencing data. We cross-validated the results of RRA analysis with those of animal experiments by taking intersections and identified three key differential genes (including

Indexed as

Cardiomyopathy, DilatedGene Expression ProfilingAnimalsComputational BiologyDoxorubicinMiceMice, Inbred C57BLReproducibility of ResultsDoxorubicinDEGsdilated cardiomyopathymicroarrayRNA-Seqrobust rank aggregation

Identifiers

PMID37108502
PMCPMC10139023
OpenAlexW4366090619

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.