Evidence map›Paper›PMID 37108170›Full record

ReviewInternational journal of molecular sciences2023

A Low-Cost Modular Imaging System for Rapid, Multiplexed Immunofluorescence Detection in Clinical Tissues.

Joshua Gu, Hannah Jian, Christine Wei, Jessica Shiu, Anand Ganesan, Weian Zhao, Per Niklas Hedde

Open access · goldAbstract readReview
In one paragraph

Review in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 89% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 0 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Joshua GuDepartment of Biological Chemistry, University of California, Irvine, CA 92697, USA.ORCID 0000-0002-5588-331X
Hannah JianDepartment of Molecular Biology and Biochemistry, University of California, Irvine, CA 92697, USA.ORCID 0009-0005-9231-9821
Christine WeiDepartment of Pharmaceutical Sciences, University of California, Irvine, CA 92697, USA.ORCID 0009-0005-0831-6813
Jessica ShiuDepartment of Dermatology, University of California, Irvine, CA 92697, USA.
Anand GanesanDepartment of Biological Chemistry, University of California, Irvine, CA 92697, USA.
Weian ZhaoDepartment of Biological Chemistry, University of California, Irvine, CA 92697, USA.
Per Niklas HeddeBeckman Laser Institute and Medical Clinic, University of California, Irvine, CA 92697, USA.ORCID 0000-0002-2994-369X
University of California, Irvine · US

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Melanie Funes · 1994 to 2026
$57.9M
Shared Resource Core: Single Cell AnalysisU54CA217378 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI LANDER, ARTHUR D, LOWENGRUB, JOHN · 2018 to 2022
$9.7M
UCI P30 Skin Center Systems Biology CoreP30AR075047 · NIAMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI ANDERSEN, BOGI, GANESAN, ANAND K · 2019 to 2025
$5.1M
Training Program in Stem Cell Translational Medicine for Neurological DisordersT32NS082174 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI PETER John DONOVAN, Leslie Michels Thompson · 2013 to 2026
$3.3M
Immunology Research Training ProgramT32AI060573 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI PEARLMAN, ERIC · 2005 to 2020
$1.9M
Fluorescence Fluctuation Spectroscopy with Light Sheet MicroscopyR21GM135493 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI GRATTON, ENRICO · 2020 to 2021
$411k
NCI NIH HHS P30 CA062203NCI NIH HHS U54 CA217378NIAID NIH HHS T32 AI060573NIAMS NIH HHS P30 AR075047NIGMS NIH HHS R21 GM135493NIH HHS AI060573NINDS NIH HHS T32 NS082174
6 · The paper itself

Abstract

To image 4-plex immunofluorescence-stained tissue samples at a low cost with cellular level resolution and sensitivity and dynamic range required to detect lowly and highly abundant targets, here we describe a robust, inexpensive (<$9000), 3D printable portable imaging device (Tissue Imager). The Tissue Imager can immediately be deployed on benchtops for in situ protein detection in tissue samples. Applications for this device are broad, ranging from answering basic biological questions to clinical pathology, where immunofluorescence can detect a larger number of markers than the standard H&E or chromogenic immunohistochemistry (CIH) staining, while the low cost also allows usage in classrooms. After characterizing our platform's specificity and sensitivity, we demonstrate imaging of a 4-plex immunology panel in human cutaneous T-cell lymphoma (CTCL) formalin-fixed paraffin-embedded (FFPE) tissue samples. From those images, positive cells were detected using CellProfiler, a popular open-source software package, for tumor marker profiling. We achieved a performance on par with commercial epifluorescence microscopes that are >10 times more expensive than our Tissue Imager. This device enables rapid immunofluorescence detection in tissue sections at a low cost for scientists and clinicians and can provide students with a hands-on experience to understand engineering and instrumentation. We note that for using the Tissue Imager as a medical device in clinical settings, a comprehensive review and approval processes would be required.

Indexed as

MicroscopyFluorescent Antibody TechniqueHumansImmunohistochemistryParaffin Embeddingcutaneous T-cell lymphomaimmunofluorescencein situ protein detectionmultiplex fluorescence imagingtumor marker profiling

Identifiers

PMID37108170
PMCPMC10138925
OpenAlexW4364368828

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.