Evidence map›Paper›PMID 37106028›Full record

ArticleScientific reports2023

Tropical lacustrine sediment microbial community response to an extreme El Niño event.

Mingfei Chen, Jessica L Conroy, Robert A Sanford, D Allie Wyman-Feravich, Joanne C Chee-Sanford, Lynn M Connor

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Mingfei ChenDepartment of Earth Science and Environmental Change, University of Illinois at Urbana-Champaign, Urbana, IL, USA. mingfeichen@lbl.gov.
Jessica L ConroyDepartment of Earth Science and Environmental Change, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
Robert A SanfordDepartment of Earth Science and Environmental Change, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
D Allie Wyman-FeravichDepartment of Geosciences, The Pennsylvania State University, University Park, PA, USA.
Joanne C Chee-SanfordDepartment of Natural Resource and Environmental Science, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
Lynn M ConnorDepartment of Natural Resource and Environmental Science, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
University of Illinois Urbana-Champaign · USPennsylvania State University · USUrbana University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Salinity can influence microbial communities and related functional groups in lacustrine sediments, but few studies have examined temporal variability in salinity and associated changes in lacustrine microbial communities and functional groups. To better understand how microbial communities and functional groups respond to salinity, we examined geochemistry and functional gene amplicon sequence data collected from 13 lakes located in Kiritimati, Republic of Kiribati (2° N, 157° W) in July 2014 and June 2019, dates which bracket the very large El Niño event of 2015-2016 and a period of extremely high precipitation rates. Lake water salinity values in 2019 were significantly reduced and covaried with ecological distances between microbial samples. Specifically, phylum- and family-level results indicate that more halophilic microorganisms occurred in 2014 samples, whereas more mesohaline, marine, or halotolerant microorganisms were detected in 2019 samples. Functional Annotation of Prokaryotic Taxa (FAPROTAX) and functional gene results (nifH, nrfA, aprA) suggest that salinity influences the relative abundance of key functional groups (chemoheterotrophs, phototrophs, nitrogen fixers, denitrifiers, sulfate reducers), as well as the microbial diversity within functional groups. Accordingly, we conclude that microbial community and functional gene groups in the lacustrine sediments of Kiritimati show dynamic changes and adaptations to the fluctuations in salinity driven by the El Niño-Southern Oscillation.

Indexed as

BacteriaMicrobiotaEl Nino-Southern OscillationGeologic SedimentsLakesMicronesia

Identifiers

PMID37106028
PMCPMC10140070
OpenAlexW4367181437

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.