Evidence map›Paper›PMID 37102148›Full record

ArticleiScience2023

A human skeletal muscle stem/myotube model reveals multiple signaling targets of cancer secretome in skeletal muscle.

Ruizhong Wang, Brijesh Kumar, Poornima Bhat-Nakshatri, Aditi S Khatpe, Michael P Murphy, Kristen E Wanczyk, Edward Simpson, Duojiao Chen, Hongyu Gao, Yunlong Liu and 3 more

Open access · goldAbstract read
In one paragraph

Article in iScience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Ruizhong WangDepartment of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Brijesh KumarDepartment of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Poornima Bhat-NakshatriDepartment of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Aditi S KhatpeDepartment of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Michael P MurphyDepartment of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Kristen E WanczykDepartment of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Edward SimpsonCenter for Computational Biology and Bioinformatics, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Duojiao ChenCenter for Computational Biology and Bioinformatics, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Hongyu GaoCenter for Computational Biology and Bioinformatics, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Yunlong LiuCenter for Computational Biology and Bioinformatics, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Emma H DoudDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Amber L MosleyDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Harikrishna NakshatriDepartment of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Indiana University School of MedicineRichard L. Roudebush VA Medical Center · US

Funding

Tumor Microenvironment and Metastasis ProgramP30CA082709 · NCI · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI David W Clapp · 1999 to 2026
$59.3M
Quality Assurance and Quality Control Project Management: Improving Submissions and Study Conduct in the Human Subjects Research Prior Approval ProcessUL1TR002529 · NCATS · INDIANA UNIVERSITY INDIANAPOLIS · PI MOE, SHARON M, WIEHE, SARAH ELIZABETH · 2018 to 2022
$27.2M
Mechanisms associated with systemic effects of cancerI01BX002764 · VA · RLR VA MEDICAL CENTER · PI NAKSHATRI, HARIKRISHNA · 2015 to 2023
–
BLRD Research Career Scientist Award ApplicationIK6BX005244 · VA · RLR VA MEDICAL CENTER · PI NAKSHATRI, HARIKRISHNA · 2020 to 2025
–
BLRD VA I01 BX002764BLRD VA IK6 BX005244NCATS NIH HHS UL1 TR002529NCI NIH HHS P30 CA082709
6 · The paper itself

Abstract

Skeletal muscle dysfunction or reprogramming due to the effects of the cancer secretome is observed in multiple malignancies. Although mouse models are routinely used to study skeletal muscle defects in cancer, because of species specificity of certain cytokines/chemokines in the secretome, a human model system is required. Here, we establish simplified multiple skeletal muscle stem cell lines (hMuSCs), which can be differentiated into myotubes. Using single nuclei ATAC-seq (snATAC-seq) and RNA-seq (snRNA-seq), we document chromatin accessibility and transcriptomic changes associated with the transition of hMuSCs to myotubes. Cancer secretome accelerated stem to myotube differentiation, altered the alternative splicing machinery and increased inflammatory, glucocorticoid receptor, and wound healing pathways in hMuSCs. Additionally, cancer secretome reduced metabolic and survival pathway associated miR-486, AKT, and p53 signaling in hMuSCs. hMuSCs underwent myotube differentiation when engrafted into NSG mice and thus providing a humanized

Indexed as

Cancer systems biologyCell biologyMolecular biology

Identifiers

PMID37102148
PMCPMC10123345
OpenAlexW4362474741

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.