Evidence map›Paper›PMID 37099600›Full record

ArticlePLoS genetics2023

A multiomic approach to defining the essential genome of the globally important pathogen Corynebacterium diphtheriae.

Emily C A Goodall, Camila Azevedo Antunes, Jens Möller, Vartul Sangal, Von Vergel L Torres, Jessica Gray, Adam F Cunningham, Paul A Hoskisson, Andreas Burkovski, Ian R Henderson

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. The Exoproteome and Surfaceome of ToxigenicJournal of proteome research · 2025
    Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 3 countries.

Emily C A GoodallInstitute for Molecular Bioscience, University of Queensland, Brisbane, Australia.ORCID 0000-0003-4846-6566
Camila Azevedo AntunesMicrobiome and Cancer Division, German Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID 0000-0002-8414-7231
Jens MöllerMicrobiology Division, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany.
Vartul SangalFaculty of Health and Life Sciences, Northumbria University, Newcastle upon Tyne, United Kingdom.
Von Vergel L TorresInstitute for Molecular Bioscience, University of Queensland, Brisbane, Australia.ORCID 0000-0003-3387-1112
Jessica GrayInstitute for Molecular Bioscience, University of Queensland, Brisbane, Australia.
Adam F CunninghamInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham, United Kingdom.
Paul A HoskissonStrathclyde Institute of Pharmacy and Biomedical Sciences, University of Strathclyde, Glasgow, United Kingdom.
Andreas BurkovskiMicrobiology Division, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany.
Ian R HendersonInstitute for Molecular Bioscience, University of Queensland, Brisbane, Australia.ORCID 0000-0002-9954-4977
The University of Queensland · AUFriedrich-Alexander-Universität Erlangen-Nürnberg · DEGerman Cancer Research Center · DENorthumbria University · GBUniversity of Birmingham · GBUniversity of Strathclyde · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diphtheria is a respiratory disease caused by Corynebacterium diphtheriae. While the toxin-based vaccine has helped control outbreaks of the disease since the mid-20th century there has been an increase in cases in recent years, including systemic infections caused by non-toxigenic C. diphtheriae strains. Here we describe the first study of gene essentiality in C. diphtheriae, providing the most-dense Transposon Directed Insertion Sequencing (TraDIS) library in the phylum Actinobacteriota. This high-density library has allowed the identification of conserved genes across the genus and phylum with essential function and enabled the elucidation of essential domains within the resulting proteins including those involved in cell envelope biogenesis. Validation of these data through protein mass spectrometry identified hypothetical and uncharacterized proteins in the proteome which are also represented in the vaccine. These data are an important benchmark and useful resource for the Corynebacterium, Mycobacterium, Nocardia and Rhodococcus research community. It enables the identification of novel antimicrobial and vaccine targets and provides a basis for future studies of Actinobacterial biology.

Indexed as

Corynebacterium diphtheriaeDiphtheriaDisease OutbreaksGene LibraryHumansMultiomics

Identifiers

PMID37099600
PMCPMC10166564
OpenAlexW4367048317

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.