Evidence map›Paper›PMID 37099244›Full record

ArticleEuropean journal of epidemiology2023

Evaluating the harmonisation potential of diverse cohort datasets.

Sarah Bauermeister, Mukta Phatak, Kelly Sparks, Lana Sargent, Michael Griswold, Caitlin McHugh, Mike Nalls, Simon Young, Joshua Bauermeister, Paul Elliott and 4 more

Abstract read
In one paragraph

Article in European journal of epidemiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Review
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  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Sarah BauermeisterDementias Platform UK, Oxford, UK. sarah.bauermeister@psych.ox.ac.uk.ORCID http://orcid.org/0000-0001-9463-6971
Mukta PhatakAlzheimer Disease Data Initiative, Kirkland, Washington, USA.
Kelly SparksEvaluserve, Bengaluru, India.
Lana SargentNational Institute of Aging, Bethesda, USA.
Michael GriswoldUniversity of Mississippi, Oxford, USA.
Caitlin McHughAlzheimer Disease Data Initiative, Kirkland, Washington, USA.
Mike NallsData Tecnica International LLC, Washington, USA.
Simon YoungDementias Platform UK, Oxford, UK.
Joshua BauermeisterDementias Platform UK, Oxford, UK.
Paul ElliottImperial College, London, England.
Andrew SteptoeUniversity College London, London, England.
David PorteousUniversity of Edinburgh, Edinburgh, Scotland.
Carole DufouilUniversity of Bordeaux, Bordeaux, France.
John GallacherDementias Platform UK, Oxford, UK.

Funding

Medical Research Council MR/L01632X/1Medical Research Council MR/T033371/1MRF MR/T0333771Wellcome Trust
6 · The paper itself

Abstract

Data discovery, the ability to find datasets relevant to an analysis, increases scientific opportunity, improves rigour and accelerates activity. Rapid growth in the depth, breadth, quantity and availability of data provides unprecedented opportunities and challenges for data discovery. A potential tool for increasing the efficiency of data discovery, particularly across multiple datasets is data harmonisation.A set of 124 variables, identified as being of broad interest to neurodegeneration, were harmonised using the C-Surv data model. Harmonisation strategies used were simple calibration, algorithmic transformation and standardisation to the Z-distribution. Widely used data conventions, optimised for inclusiveness rather than aetiological precision, were used as harmonisation rules. The harmonisation scheme was applied to data from four diverse population cohorts.Of the 120 variables that were found in the datasets, correspondence between the harmonised data schema and cohort-specific data models was complete or close for 111 (93%). For the remainder, harmonisation was possible with a marginal a loss of granularity.Although harmonisation is not an exact science, sufficient comparability across datasets was achieved to enable data discovery with relatively little loss of informativeness. This provides a basis for further work extending harmonisation to a larger variable list, applying the harmonisation to further datasets, and incentivising the development of data discovery tools.

Indexed as

Datasets as TopicKnowledge DiscoveryHumansReference StandardsCohortC-surv data modelData discoveryData harmonisationDatasetsData visualisation

Identifiers

PMID37099244
PMCPMC10232583

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.