ArticleBMC plant biology2023
The mitochondrial genome of the diploid oat Avena longiglumis.
Article in BMC plant biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
26 citing papers in PubMed, 27 citations in OpenAlex.
- Complete assembly of Onobrychis viciifolia mitochondrial genome reveals evolutionary dynamics.Planta · 2026Article
- Assembly and Comparative Analysis of the Complete Mitochondrial Genome ofCurrent issues in molecular biology · 2026Article
- Assembly and comparative analysis of the complete mitochondrial genome of hexaploid oat (Avena sativa).BMC plant biology · 2026Article
- Assembly and comparative analysis of the multipartite mitochondrial genome ofFrontiers in plant science · 2026Article
- The multichromosomal structure evolution ofFrontiers in plant science · 2026Article
- Assembly and characterization of the complete mitochondrial genome ofFrontiers in plant science · 2026Article
- Complete mitochondrial genome of Persicaria maackiana reveals genome features, phylogenetic relationships, and nucleotide substitution rates.Scientific reports · 2025Article
- Complete mitochondrial genome assembly and structural feature analysis of Thinopyrum elongatum (Poaceae).Planta · 2025Article
- Assembly and comparative analysis of four complete mitochondrial genomes of Pulsatilla species.BMC plant biology · 2025Article
- Phylogenetic reconstruction and species delimitation in Stipeae with special reference to Stipa (Poaceae, Pooideae) using mitochondrial genomes.Cladistics : the international journal of the Willi Hennig Society · 2025Article
- Article
- Article
- Characterize the Complete Mitogenome ofEcology and evolution · 2025Article
- Assembly and comparative analysis of the complete mitochondrial of Spodiopogon sagittifolius, an endemic and protective species from Yunnan, China.BMC plant biology · 2025Article
- Mitochondrial Genome Insights into Evolution and Gene Regulation inInternational journal of molecular sciences · 2025Article
- Super-large record-breaking mitochondrial genome ofFrontiers in plant science · 2025Article
- Assembly and comparative analysis of the complete mitochondrial genome ofFrontiers in plant science · 2025Article
- Mitochondrial genome complexity in Erodium stephanianum (Geraniaceae): nanopore sequencing reveals chloroplast gene transfer and DNA rearrangements.Frontiers in genetics · 2025Article
- Complete Mitogenome Assembly and Comparative Analysis ofInternational journal of molecular sciences · 2024Article
- Assembly and comparative analysis of the first complete mitochondrial genome of Setaria italica.Planta · 2024Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
7 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundAvena longiglumis Durieu (2n = 2x = 14) is a wild relative of cultivated oat (Avena sativa, 2n = 6x = 42) with good agronomic and nutritional traits. The plant mitochondrial genome has a complex organization and carries genetic traits of value in exploiting genetic resources, not least male sterility alleles used to generate F
resultsThe complete mitochondrial genome of A. longiglumis can be represented by one master circular genome being 548,445 bp long with a GC content of 44.05%. It can be represented by linear or circular DNA molecules (isoforms or contigs), with multiple alternative configurations mediated by long (4,100-31,235 bp) and medium (144-792 bp) size repeats. Thirty-five unique protein-coding genes, three unique rRNA genes, and 11 unique tRNA genes are identified. The mitogenome is rich in duplications (up to 233 kb long) and multiple tandem or simple sequence repeats, together accounting for more than 42.5% of the total length. We identify homologous sequences between the mitochondrial, plastid and nuclear genomes, including the exchange of eight plastid-derived tRNA genes, and nuclear-derived retroelement fragments. At least 85% of the mitogenome is duplicated in the A. longiglumis nuclear genome. We identify 269 RNA editing sites in mitochondrial protein-coding genes including stop codons truncating ccmFC transcripts.
conclusionsComparative analysis with Poaceae species reveals the dynamic and ongoing evolutionary changes in mitochondrial genome structure and gene content. The complete mitochondrial genome of A. longiglumis completes the last link of the oat reference genome and lays the foundation for oat breeding and exploiting the biodiversity in the genus.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.