Evidence map›Paper›PMID 37098460›Full record

ArticleBMC genomics2023

Transcriptomic analysis reveals that Bacillomycin D-C16 induces multiple pathways of disease resistance in cherry tomato.

Yingying Xue, Jing Sun, Fengxia Lu, Xiaomei Bie, Yuanhong Li, Yingjian Lu, Zhaoxin Lu, Fuxing Lin

Erratum issuedOpen access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Yingying XueCollege of Food Science and Technology, Nanjing Agricultural University, Nanjing, China.
Jing SunCollege of Food Science and Engineering, Nanjing University of Finance and Economics, Nanjing, China.
Fengxia LuCollege of Food Science and Technology, Nanjing Agricultural University, Nanjing, China.
Xiaomei BieCollege of Food Science and Technology, Nanjing Agricultural University, Nanjing, China.
Yuanhong LiSchool of Public Health, Xuzhou Medical University, Xuzhou, China.
Yingjian LuCollege of Food Science and Engineering, Nanjing University of Finance and Economics, Nanjing, China.
Zhaoxin LuCollege of Food Science and Technology, Nanjing Agricultural University, Nanjing, China. fmb@njau.edu.cn.
Fuxing LinCollege of Food Science and Technology, Nanjing Agricultural University, Nanjing, China. lfx@xzhmu.edu.cn.
Nanjing Agricultural University · CNNanjing University of Finance and Economics · CNXuzhou Medical College · CN

Funding

National Natural Science Foundation of China No.31571887Scientific Research Foundation for Excellent Talents of Xuzhou Medical University D2020022
6 · The paper itself

Abstract

backgroundBacillomycin D-C16 can induce resistance in cherry tomato against pathogens; however, the underlying molecular mechanism is poorly understood. Here, the effect of Bacillomycin D-C16 on induction of disease resistance in cherry tomato was investigated using a transcriptomic analysis.

resultsTranscriptomic analysis revealed a series of obvious enrichment pathways. Bacillomycin D-C16 induced phenylpropanoid biosynthesis pathways and activated the synthesis of defense-related metabolites including phenolic acids and lignin. Moreover, Bacillomycin D-C16 triggered a defense response through both hormone signal transduction and plant-pathogen interactions pathways, and increased the transcription of several transcription factors (e.g., AP2/ERF, WRKY and MYB). These transcription factors might contribute to the further activated the expression of defense-related genes (PR1, PR10 and CHI) and stimulated the accumulation of H

conclusionBacillomycin D-C16 can induce resistance in cherry tomato by activating the phenylpropanoid biosynthesis pathway, hormone signal transduction pathway and plant-pathogen interactions pathway, thus activating comprehensive defense reaction against pathogen invasion. These results provided a new insight into the bio-preservation of cherry tomato by the Bacillomycin D-C16.

Indexed as

Solanum lycopersicumAntimicrobial Cationic PeptidesDisease ResistanceHormonesHydrogen PeroxidePlant DiseasesTranscription FactorsTranscriptomeAntimicrobial Cationic Peptidesbacillomycin DHormonesHydrogen PeroxideTranscription FactorsBacillomycin D-C16Cherry tomatoInduced resistanceTranscriptomic analysis

Identifiers

PMID37098460
PMCPMC10131338
OpenAlexW4366997656

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.