Evidence map›Paper›PMID 37098352›Full record

ArticleAmerican journal of human genetics2023

Autism-specific PTEN p.Ile135Leu variant and an autism genetic background combine to dysregulate cortical neurogenesis.

Shuai Fu, Luke A D Bury, Jaejin Eum, Anthony Wynshaw-Boris

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in American journal of human genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 38 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Head Growth Trajectories During the First Year of Life and Risk of Autism Spectrum Disorder.Autism research : official journal of the International Society for Autism Research · 2026
    Article
  8. Article
  9. Review
  10. Cell villages and Dirichlet modeling map human cell fitness genetics.bioRxiv : the preprint server for biology · 2025
    Article
  11. Review
  12. Autism risk genes converge onbioRxiv : the preprint server for biology · 2025
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Shuai FuDepartment of Genetics and Genome Sciences, Case Western Reserve University, Cleveland, OH 44106, USA; Department of Molecular Medicine, Cleveland Clinic Lerner College of Medicine, Cleveland, OH 44195, USA.
Luke A D BuryDepartment of Genetics and Genome Sciences, Case Western Reserve University, Cleveland, OH 44106, USA.
Jaejin EumDepartment of Genetics and Genome Sciences, Case Western Reserve University, Cleveland, OH 44106, USA.
Anthony Wynshaw-BorisDepartment of Genetics and Genome Sciences, Case Western Reserve University, Cleveland, OH 44106, USA. Electronic address: ajw168@case.edu.
Case Western Reserve University · USCleveland Clinic Lerner College of Medicine · US

Funding

NRSA Training CoreTL1TR002549 · NCATS · CASE WESTERN RESERVE UNIVERSITY · PI HARDING, CLIFFORD V · 2018 to 2022
$2.9M
A conserved transcriptional cascade involved in brain overgrowth, social behavior and autismR01MH113106 · NIMH · CASE WESTERN RESERVE UNIVERSITY · PI WYNSHAW-BORIS, ANTHONY J. · 2017 to 2021
$2.9M
A novel embryonic transcriptional cascade required for adult social and repetitive behaviorR01MH114601 · NIMH · CASE WESTERN RESERVE UNIVERSITY · PI WYNSHAW-BORIS, ANTHONY J. · 2017 to 2021
$2.6M
CYTO VISION WORKSTATION FOR USE IN MULTI-USER FACILITY: CYSTIC FIBROSISS10RR021228 · NCRR · CASE WESTERN RESERVE UNIVERSITY · PI CONRAD, PATRICIA A · 2005 to 2005
$178k
NCATS NIH HHS TL1 TR002549NCRR NIH HHS S10 RR021228NIMH NIH HHS R01 MH113106NIMH NIH HHS R01 MH114601
6 · The paper itself

Abstract

Alterations in cortical neurogenesis are implicated in neurodevelopmental disorders including autism spectrum disorders (ASDs). The contribution of genetic backgrounds, in addition to ASD risk genes, on cortical neurogenesis remains understudied. Here, using isogenic induced pluripotent stem cell (iPSC)-derived neural progenitor cells (NPCs) and cortical organoid models, we report that a heterozygous PTEN c.403A>C (p.Ile135Leu) variant found in an ASD-affected individual with macrocephaly dysregulates cortical neurogenesis in an ASD-genetic-background-dependent fashion. Transcriptome analysis at both bulk and single-cell level revealed that the PTEN c.403A>C variant and ASD genetic background affected genes involved in neurogenesis, neural development, and synapse signaling. We also found that this PTEN p.Ile135Leu variant led to overproduction of NPC subtypes as well as neuronal subtypes including both deep and upper layer neurons in its ASD background, but not when introduced into a control genetic background. These findings provide experimental evidence that both the PTEN p.Ile135Leu variant and ASD genetic background contribute to cellular features consistent with ASD associated with macrocephaly.

Indexed as

Autism Spectrum DisorderAutistic DisorderInduced Pluripotent Stem CellsMegalencephalyNeural Stem CellsHumansNeurogenesisNeuronsPTEN PhosphohydrolasePTEN PhosphohydrolasePTEN protein, humanASD genetic backgroundcortical organoidsCRISPR-Cas9 genome editingiPSCPTENscRNA-seq

Identifiers

PMID37098352
PMCPMC10183467
OpenAlexW4366824492

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.