Evidence map›Paper›PMID 37098340›Full record

ArticleMolecular cell2023

NSD1 deposits histone H3 lysine 36 dimethylation to pattern non-CG DNA methylation in neurons.

Nicole Hamagami, Dennis Y Wu, Adam W Clemens, Sabin A Nettles, Aidan Li, Harrison W Gabel

Open access · greenAbstract read
In one paragraph

Article in Molecular cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 39 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Many faces of mammalian NSD methyltransferases.Cellular & molecular biology letters · 2026
    Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Chromatin modifiers in neurodevelopment.Frontiers in molecular neuroscience · 2025
    Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Nicole HamagamiDepartment of Neuroscience, Washington University School of Medicine, St Louis, MO 63110-1093, USA.
Dennis Y WuDepartment of Neuroscience, Washington University School of Medicine, St Louis, MO 63110-1093, USA.
Adam W ClemensDepartment of Neuroscience, Washington University School of Medicine, St Louis, MO 63110-1093, USA.
Sabin A NettlesDepartment of Neuroscience, Washington University School of Medicine, St Louis, MO 63110-1093, USA.
Aidan LiDepartment of Neuroscience, Washington University School of Medicine, St Louis, MO 63110-1093, USA.
Harrison W GabelDepartment of Neuroscience, Washington University School of Medicine, St Louis, MO 63110-1093, USA. Electronic address: gabelh@wustl.edu.
Washington University in St. Louis · US

Funding

WUIDDRC Supplement-Supporting the health and well-being of children with intellectual and developmental disability during COVID-19 pandemicP50HD103525 · NICHD · WASHINGTON UNIVERSITY · PI JEFFREY D MILBRANDT · 2020 to 2026
$15.5M
SIGNAL TRANSDUCTION PATHWAYS REGULATING NEURON SURVIVALR01NS041021 · NINDS · WASHINGTON UNIVERSITY · PI GABEL, HARRISON W · 2001 to 2023
$7.7M
MECHANISMS OF EPIGENETIC REGULATION IN NERVOUS SYSTEM DEVELOPMENTR01MH117405 · NIMH · WASHINGTON UNIVERSITY · PI Harrison W Gabel · 2019 to 2026
$3.9M
The role of H3K36 methyltransferases on non-CpG methylation patterning in the mammalian brainF30HD110156 · NICHD · WASHINGTON UNIVERSITY · PI HAMAGAMI-SAMSON, NICOLE · 2022 to 2025
$164k
NICHD NIH HHS F30 HD110156NICHD NIH HHS P50 HD103525NIMH NIH HHS R01 MH117405NINDS NIH HHS R01 NS041021
6 · The paper itself

Abstract

During postnatal development, the DNA methyltransferase DNMT3A deposits high levels of non-CG cytosine methylation in neurons. This methylation is critical for transcriptional regulation, and loss of this mark is implicated in DNMT3A-associated neurodevelopmental disorders (NDDs). Here, we show in mice that genome topology and gene expression converge to shape histone H3 lysine 36 dimethylation (H3K36me2) profiles, which in turn recruit DNMT3A and pattern neuronal non-CG methylation. We show that NSD1, an H3K36 methyltransferase mutated in NDD, is required for the patterning of megabase-scale H3K36me2 and non-CG methylation in neurons. We find that brain-specific deletion of NSD1 causes altered DNA methylation that overlaps with DNMT3A disorder models to drive convergent dysregulation of key neuronal genes that may underlie shared phenotypes in NSD1- and DNMT3A-associated NDDs. Our findings indicate that H3K36me2 deposited by NSD1 is important for neuronal non-CG DNA methylation and suggest that the H3K36me2-DNMT3A-non-CG-methylation pathway is likely disrupted in NSD1-associated NDDs.

Indexed as

DNA MethylationHistonesAnimalsHistone-Lysine N-MethyltransferaseLysineMiceNeuronsHistone-Lysine N-MethyltransferaseHistonesLysineNsd1 protein, mouseDNA methylationDNMT3Agenome topologyhistone methylationneurodevelopmental diseasenon-CG methylationNSD1Sotos syndrome

Identifiers

PMID37098340
PMCPMC10230755
OpenAlexW4366824684

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.