Evidence map›Paper›PMID 37097538›Full record

ArticleMolecular biology reports2023

The roles of long non-coding RNAs in the necroptotic signaling of colon cancer cells.

Esra Bozgeyik, Haydar Bagis, Ibrahim Bozgeyik, Sayad Kocahan

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In one paragraph

Article in Molecular biology reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Esra BozgeyikDepartment of Medical Services and Techniques, Vocational School of Health Services, Adiyaman University, Adiyaman, Turkey. gyk.esra@gmail.com.ORCID http://orcid.org/0000-0002-8726-3182
Haydar BagisDepartment of Medical Genetics, Faculty of Medicine, Adiyaman University, Adiyaman, Turkey.ORCID http://orcid.org/0000-0002-1140-8058
Ibrahim BozgeyikDepartment of Medical Biology, Faculty of Medicine, Adiyaman University, Adiyaman, Turkey.ORCID http://orcid.org/0000-0003-1483-2580
Sayad KocahanDepartment of Physiology, Gulhane Medical Faculty, Health Sciences University, Ankara, Turkey.ORCID http://orcid.org/0000-0002-3161-1280
Adıyaman University · TRSağlık Bilimleri Üniversitesi · TR

Funding

Adiyaman Üniversitesi SHMYOMAP/2021-0001
6 · The paper itself

Abstract

backgroundNecroptosis is a controlled form of necrosis which can be stimulated in cases where the apoptosis signal is absent. Necroptosis can be induced by DR family ligands and by various intracellular and extracellular stimuli that triggers the activation of DR family ligands. Necrostatins, which are specific RIP1 antagonists, prevent necroptosis by inhibiting RIP1 kinase, allowing survival and propagation of cells in the presence of DR ligands. Furthermore, there is a mounting evidence that long non-coding RNA (lncRNA) molecules accomplish vital functions in cell death processes such as apoptosis, autophagy, pyroptosis, and necroptosis. Accordingly, here we aimed to decipher the lncRNAs that are involved in the control and maintenance of necroptosis signaling. METHODS AND

resultsColon cancer cell lines, HT-29 and HCT-116 were used for the study. For the chemical modulation of necroptosis signaling, 5-Fluorouracil, TNF-α and/or Necrostatin-1 were used. Gene expression levels were determined by quantitative real-time PCR. Remarkably, lncRNA P50-associated COX-2 extragenic RNA (PACER) was identified to be suppressed in necroptosis-induced colon cancers, whereas the expression of PACER was restored when necroptosis was suppressed. In addition, no detectable change was observed in HCT-116 colon cancer cells, as these cells lack the expression of RIP3 kinase.

conclusionsCollectively, current findings clearly imply that PACER have key regulatory roles in the control of necroptotic cell death signaling circuitry. Notably, the tumor promoter activity of PACER might be responsible for the lack of necroptotic death signal in cancer cells. Also, RIP3 kinase seems to be essential component in PACER-associated necroptosis.

Indexed as

Colonic NeoplasmsRNA, Long NoncodingApoptosisHT29 CellsHumansNecroptosisNecrosisReceptor-Interacting Protein Serine-Threonine KinasesReceptor-Interacting Protein Serine-Threonine KinasesRNA, Long NoncodingCancerColon cancerLncRNANecroptosisPACER

Identifiers

PMID37097538
OpenAlexW4366988034

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.