Evidence map›Paper›PMID 37096163›Full record

ArticleMolecular therapy. Nucleic acids2023

GOLGA8 increases bulk antisense oligonucleotide uptake and activity in mammalian cells.

Moira A McMahon, Meghdad Rahdar, Swagatam Mukhopadhyay, Huynh-Hoa Bui, Christopher Hart, Sagar Damle, Margo Courtney, Michael W Baughn, Don W Cleveland, C Frank Bennett

Open access · goldAbstract read
In one paragraph

Article in Molecular therapy. Nucleic acids, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Moira A McMahonIonis Pharmaceuticals, Inc., Carlsbad, CA 92010, USA.
Meghdad RahdarIonis Pharmaceuticals, Inc., Carlsbad, CA 92010, USA.
Swagatam MukhopadhyayIonis Pharmaceuticals, Inc., Carlsbad, CA 92010, USA.
Huynh-Hoa BuiIonis Pharmaceuticals, Inc., Carlsbad, CA 92010, USA.
Christopher HartIonis Pharmaceuticals, Inc., Carlsbad, CA 92010, USA.
Sagar DamleIonis Pharmaceuticals, Inc., Carlsbad, CA 92010, USA.
Margo CourtneyIonis Pharmaceuticals, Inc., Carlsbad, CA 92010, USA.
Michael W BaughnLudwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA 92093-0670, USA.
Don W ClevelandLudwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA 92093-0670, USA.
C Frank BennettIonis Pharmaceuticals, Inc., Carlsbad, CA 92010, USA.
Ionis Pharmaceuticals (United States) · USLudwig Cancer Research · US

Funding

NEURONAL FILAMENT SYNTHESIS, ASSEMBLY, AND FUNCTIONR01NS027036 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Bogdan Bintu, Don W Cleveland · 1989 to 2026
$11.8M
Mechanisms of chromosome segregation, aneuploidy, and tumorigenesisR35GM122476 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Don W Cleveland · 2017 to 2026
$9.0M
Training Program in Basic Clinical GeneticsT32GM008666 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMILTON, BRUCE A · 1998 to 2021
$8.6M
NIGMS NIH HHS R35 GM122476NIGMS NIH HHS T32 GM008666NINDS NIH HHS R01 NS027036
6 · The paper itself

Abstract

Antisense oligonucleotides (ASOs) are short synthetic nucleic acids that recognize and bind to complementary RNA to modulate gene expression. It is well established that single-stranded, phosphorothioate-modified ASOs enter cells independent of carrier molecules, primarily via endocytic pathways, but that only a small portion of internalized ASO is released into the cytosol and/or nucleus, rendering the majority of ASO inaccessible to the targeted RNA. Identifying pathways that can increase the available ASO pool is valuable as a research tool and therapeutically. Here, we conducted a functional genomic screen for ASO activity by engineering GFP splice reporter cells and applying genome-wide CRISPR gene activation. The screen can identify factors that enhance ASO splice modulation activity. Characterization of hit genes uncovered GOLGA8, a largely uncharacterized protein, as a novel positive regulator enhancing ASO activity by ∼2-fold. Bulk ASO uptake is 2- to 5-fold higher in GOLGA8-overexpressing cells where GOLGA8 and ASOs are observed in the same intracellular compartments. We find GOLGA8 is highly localized to the

Indexed as

antisense oligonucleotideASOCRISPR-Casgene activationgene knockdowngene splicingGOLGA8GolgiMT: Oligonucleotides: Therapies and Applications

Identifiers

PMID37096163
PMCPMC10122063
OpenAlexW4360999266

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.