Evidence map›Paper›PMID 37095917›Full record

ArticleHeliyon2023

Copy number analysis from whole-exome sequencing data revealed a novel homozygous deletion in

Mohammad Reza Seyedtaghia, Mohammad Soudyab, Mohammad Shariati, Reza Jafarzadeh Esfehani, Shabnam Vafadar, Neda Shalaei, Vahid Nouri, Michael Zech, Julianne Winkelmann, Ali Shoeibi and 1 more

Open access · goldAbstract readCase Reports
In one paragraph

Article in Heliyon, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Mohammad Reza SeyedtaghiaDepartment of Medical Genetics and Molecular Medicine, School of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.
Mohammad SoudyabDepartment of Medical Genetics and Molecular Medicine, School of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.
Mohammad ShariatiDepartment of Neurology, School of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.
Reza Jafarzadeh EsfehaniMedical Genetics Research Center, Mashhad University of Medical Sciences, Mashhad, Iran.
Shabnam VafadarDepartment of Neurology, School of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.
Neda ShalaeiDepartment of Neurology, School of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.
Vahid NouriAcademic Center for Education, Culture, and Research (ACECR)-Khorasan Razavi, Mashhad, Iran.
Michael ZechInstitute of Neurogenomics, Helmholtz Zentrum München, Munich, Germany.
Julianne WinkelmannInstitute of Neurogenomics, Helmholtz Zentrum München, Munich, Germany.
Ali ShoeibiDepartment of Neurology, School of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.
Ariane Sadr-NabaviDepartment of Medical Genetics and Molecular Medicine, School of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.
Mashhad University of Medical Sciences · IRHelmholtz Zentrum München · DEAcademic Center for Education, Culture and Research · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Parkinson's disease (PD), a neurodegenerative disease characterized by both motor neuron and non-motor neuron symptoms, is the most frequent neurodegenerative disease after Alzheimer's disease. Both genetic and environmental factors take part in disease etiology. Most cases are considered complex multifactorial diseases. About 15% of PD appear in the familial form, and about 5% of all cases arise from a single gene mutation. Among Mendelian causes of PD, PARK7 is one of the autosomal recessive forms due to loss-of-function mutations in both gene alleles. Both single nucleotide variants (SNVs) and copy number variations (CNVs) are observed in PARK7. This study presents an Iranian family with familial PD where some relatives had psychiatric disorders. A homozygous 1617 bp deletion in a female with early-onset PD was detected through copy-number analysis from whole-exome sequencing (WES) data in this consanguineous family. Further investigation by surveying microhomology revealed that the actual size of the deletion is 3,625 bp. This novel CNV that was in the PARK7gene is supposed to co-relation with early-onset PD and infertility in this family.

Indexed as

Alu repeatsCNVPARK7Parkinson's diseaseWES

Identifiers

PMID37095917
PMCPMC10122007
OpenAlexW4362720872

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.