Evidence map›Paper›PMID 37095552›Full record

ArticleMobile DNA2023

Analysis of antibiotic resistance gene cassettes in a newly identified Salmonella enterica serovar Gallinarum strain in Korea.

Thanh Quang Tran, Minyoung Park, Jong Eun Lee, Soo Hyun Kim, Jae-Ho Jeong, Hyon E Choy

Open access · goldAbstract read
In one paragraph

Article in Mobile DNA, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Thanh Quang TranDepartments of Microbiology, Basic Medical Research Building, Chonnam National University Medical College, 322 Seoyangro, Hwansun, Jeonnam, 519-763, South Korea.
Minyoung ParkDNA Link, Inc, Seodaemun-Gu Bugahyeon-Ro 150, Industry Coop Bldg. 2Nd Fl, Seoul, 120-140, South Korea.
Jong Eun LeeDNA Link, Inc, Seodaemun-Gu Bugahyeon-Ro 150, Industry Coop Bldg. 2Nd Fl, Seoul, 120-140, South Korea.
Soo Hyun KimDepartments of Microbiology, Basic Medical Research Building, Chonnam National University Medical College, 322 Seoyangro, Hwansun, Jeonnam, 519-763, South Korea.
Jae-Ho JeongDepartments of Microbiology, Basic Medical Research Building, Chonnam National University Medical College, 322 Seoyangro, Hwansun, Jeonnam, 519-763, South Korea. jeongjaeho@chonnam.ac.kr.
Hyon E ChoyDepartments of Microbiology, Basic Medical Research Building, Chonnam National University Medical College, 322 Seoyangro, Hwansun, Jeonnam, 519-763, South Korea. hyonchoy@chonnam.ac.kr.
Chonnam National University · KRChonnam National University Hwasun Hospital · KRDNA Link (South Korea) · KR

Funding

National Research Foundation of Korea No. 2020R1A5A2031185
6 · The paper itself

Abstract

Antimicrobial resistant pathogens are a global health threat driven by the indiscriminate use of antimicrobials. Antimicrobial resistance can be acquired by resistance genes encoded by mobile genetic elements. In this study, we identified a strain of Salmonella enterica serovar Gallinarum (SG4021) from an infected chicken in Korea and characterized the presence of resistance genes in its plasmid by whole genome sequencing. The sequence was then compared with that of a plasmid (P2) from strain SG_07Q015, the only other strain of S. Gallinarum isolated in Korea for which a genome sequence is available. The results revealed that both strains harbored nearly identical DNA carrying antibiotic resistance gene cassettes inserted into integron In2 of the transposable element Tn21, namely an aadA1 resistance gene conferring resistance to aminoglycosides and a sul1 resistance gene conferring resistance to sulfonamide. Interestingly, despite the presence of sul1 in SG4021, an antibiotic sensitivity test revealed that it was sensitive to sulfonamides. Further analysis revealed that this disparity was due to the insertion of a ~ 5 kb ISCR16 sequence downstream of the promoter driving sul1 expression in SG4021. Using various mutants, we showed that the insertion of ISCR16 blocked the expression of the sul1 gene from the upstream promoter. Therefore, the functionality of antimicrobial resistance genes determines phenotypic antimicrobial resistance.

Indexed as

Antibiotic resistanceSalmonella enterica serovar GallinarumTranscriptionTransposable element

Identifiers

PMID37095552
PMCPMC10124037
OpenAlexW4366829063

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.