Evidence map›Paper›PMID 37095438›Full record

SynthesisBMC cancer2023

Meta-analysis of Osteopontin splice variants in cancer.

Yu An, Gulimirerouzi Fnu, Changchun Xie, Georg F Weber

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in BMC cancer, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Yu An *Division of Biostatistics and Bioinformatics, Department of Environmental and Public Health Sciences, University of Cincinnati Academic Health Center, Cincinnati, OH, USA.
Gulimirerouzi Fnu *James L. Winkle College of Pharmacy, College of Pharmacy, University of Cincinnati Academic Health Center, 231 Albert Sabin Way, Cincinnati, OH, USA.
Changchun XieDivision of Biostatistics and Bioinformatics, Department of Environmental and Public Health Sciences, University of Cincinnati Academic Health Center, Cincinnati, OH, USA.
Georg F WeberJames L. Winkle College of Pharmacy, College of Pharmacy, University of Cincinnati Academic Health Center, 231 Albert Sabin Way, Cincinnati, OH, USA. georg.weber@uc.edu.ORCID http://orcid.org/0000-0003-3996-677X
Sabin Vaccine Institute · USUniversity of Cincinnati Medical Center · US

Funding

Metabolic Mechanisms in Cancer ProgressionR15CA224104 · NCI · UNIVERSITY OF CINCINNATI · PI WEBER, GEORG F · 2018 to 2018
$480k
NCI NIH HHS CA224104NCI NIH HHS R15 CA224104
6 · The paper itself

Abstract

backgroundThe cytokine Osteopontin is a mediator of tumor progression and cancer metastasis. In 2006, we reported that (in addition to the full-length form -a) splice variants of Osteopontin (forms -b and -c) are produced selectively by transformed cells. Through June 2021, 36 PubMed-indexed journal articles have studied Osteopontin splice variants in various cancer patients.

methodsApplying a categorical approach previously developed by us, here we conduct a meta-analysis of the pertinent literature. We supplement this with evaluation of the relevant entries in the TSVdb database, which focusses on splice variant expression, thus including the additional variants -4 and -5. The analysis covers 5886 patients across 15 tumors from the literature and 10,446 patients across 33 tumors from TSVdb.

resultsThe database yields positive results more frequently than the categorical meta-analysis. The two sources are in agreement on the elevation of OPN-a, OPN-b, and OPN-c in lung cancer and the elevation of OPN-c in breast cancer as compared to healthy tissue. Specific splice variants are associated with grade, stage, or patient survival pertaining to various cancers.

conclusionsThere are cases of persisting discrepancies, which require further investigation to clarify the Osteopontin splice variant utilization, so that their diagnostic, prognostic and potentially predictive potential can be brought to fruition.

Indexed as

Breast NeoplasmsOsteopontinBiomarkers, TumorFemaleHumansPrognosisBiomarkers, TumorOsteopontinBiomarkerCancerGradeOsteopontinPrognosisSplice variantStageSurvival

Identifiers

PMID37095438
PMCPMC10124019
OpenAlexW4366830260

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.