Evidence map›Paper›PMID 37095428›Full record

ArticleBMC plant biology2023

Genome-wide identification and expression analysis of BZR gene family and associated responses to abiotic stresses in cucumber (Cucumis sativus L.).

Shilei Luo, Guobin Zhang, Zeyu Zhang, Zilong Wan, Zeci Liu, Jian Lv, Jihua Yu

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
7.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Shilei LuoState Key Laboratory of Aridland Crop Science, Gansu Agricultural University, Lanzhou, China.
Guobin ZhangCollege of Horticulture, Gansu Agricultural University, Lanzhou, China.
Zeyu ZhangCollege of Horticulture, Gansu Agricultural University, Lanzhou, China.
Zilong WanCollege of Horticulture, Gansu Agricultural University, Lanzhou, China.
Zeci LiuCollege of Horticulture, Gansu Agricultural University, Lanzhou, China.
Jian LvCollege of Horticulture, Gansu Agricultural University, Lanzhou, China.
Jihua YuState Key Laboratory of Aridland Crop Science, Gansu Agricultural University, Lanzhou, China. yujihuagg@163.com.
Gansu Agricultural University · CN

Funding

Gansu Agricultural University GSCS-2021-09Gansu Provincial Department of Education GSSYLXM-02Science and Technology Department of Gansu Province 21JR7RA816Science and Technology Department of Gansu Province ZCYD-2021-5
6 · The paper itself

Abstract

backgroundBRASSINAZOLE-RESISTANT (BZR) is a class of specific transcription factor (TFs) involved in brassinosteroid (BR) signal transduction. The regulatory mechanism of target genes mediated by BZR has become one of the key research areas in plant BR signaling networks. However, the functions of the BZR gene family in cucumber have not been well characterized.

resultsIn this study, six CsBZR gene family members were identified by analyzing the conserved domain of BES1 N in the cucumber genome. The size of CsBZR proteins ranges from 311 to 698 amino acids and are mostly located in the nucleus. Phylogenetic analysis divided CsBZR genes into three subgroups. The gene structure and conserved domain showed that the BZR genes domain in the same group was conserved. Cis-acting element analysis showed that cucumber BZR genes were mainly involved in hormone response, stress response and growth regulation. The qRT-PCR results also confirmed CsBZR response to hormones and abiotic stress.

conclusionCollectively, the CsBZR gene is involved in regulating cucumber growth and development, particularly in hormone response and response to abiotic stress. These findings provide valuable information for understanding the structure and expression patterns of BZR genes.

Indexed as

Cucumis sativusBrassinosteroidsGene Expression Regulation, PlantGenome, PlantHormonesMultigene FamilyPhylogenyPlant ProteinsStress, PhysiologicalTriazolesbrassinazoleBrassinosteroidsHormonesPlant ProteinsTriazolesAbiotic stressBZR transcription factorGenome-wide expression analysis

Identifiers

PMID37095428
PMCPMC10123990
OpenAlexW4366824238

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.