Evidence map›Paper›PMID 37095203›Full record

ArticleCommunications biology2023

Morphological profiling by high-throughput single-cell biophysical fractometry.

Ziqi Zhang, Kelvin C M Lee, Dickson M D Siu, Michelle C K Lo, Queenie T K Lai, Edmund Y Lam, Kevin K Tsia

Abstract read
In one paragraph

Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Ziqi ZhangDepartment of Electrical and Electronic Engineering, The University of Hong Kong, Pokfulam, Hong Kong.ORCID 0000-0003-1387-4500
Kelvin C M LeeDepartment of Electrical and Electronic Engineering, The University of Hong Kong, Pokfulam, Hong Kong.
Dickson M D SiuDepartment of Electrical and Electronic Engineering, The University of Hong Kong, Pokfulam, Hong Kong.
Michelle C K LoDepartment of Electrical and Electronic Engineering, The University of Hong Kong, Pokfulam, Hong Kong.
Queenie T K LaiDepartment of Electrical and Electronic Engineering, The University of Hong Kong, Pokfulam, Hong Kong.
Edmund Y LamDepartment of Electrical and Electronic Engineering, The University of Hong Kong, Pokfulam, Hong Kong.
Kevin K TsiaDepartment of Electrical and Electronic Engineering, The University of Hong Kong, Pokfulam, Hong Kong. tsia@hku.hk.ORCID 0000-0002-6394-9657

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Complex and irregular cell architecture is known to statistically exhibit fractal geometry, i.e., a pattern resembles a smaller part of itself. Although fractal variations in cells are proven to be closely associated with the disease-related phenotypes that are otherwise obscured in the standard cell-based assays, fractal analysis with single-cell precision remains largely unexplored. To close this gap, here we develop an image-based approach that quantifies a multitude of single-cell biophysical fractal-related properties at subcellular resolution. Taking together with its high-throughput single-cell imaging performance (~10,000 cells/sec), this technique, termed single-cell biophysical fractometry, offers sufficient statistical power for delineating the cellular heterogeneity, in the context of lung-cancer cell subtype classification, drug response assays and cell-cycle progression tracking. Further correlative fractal analysis shows that single-cell biophysical fractometry can enrich the standard morphological profiling depth and spearhead systematic fractal analysis of how cell morphology encodes cellular health and pathological conditions.

Indexed as

Lung NeoplasmsHumans

Identifiers

PMID37095203
PMCPMC10126163

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.