Evidence map›Paper›PMID 37093913›Full record

ArticleJournal of animal science and technology2023

Analysis of antibiotic resistance genes in pig feces during the weaning transition using whole metagenome shotgun sequencing.

Gi Beom Keum, Eun Sol Kim, Jinho Cho, Minho Song, Kwang Kyo Oh, Jae Hyoung Cho, Sheena Kim, Hyeri Kim, Jinok Kwak, Hyunok Doo and 3 more

Open access · goldAbstract read
In one paragraph

Article in Journal of animal science and technology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. ProbioticJournal of animal science and technology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. The current state of phage therapy in livestock and companion animals.Journal of animal science and technology · 2024
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Gi Beom KeumDepartment of Animal Resources Science, Dankook University, Cheonan 31116, Korea.ORCID https://orcid.org/0000-0001-6006-9577
Eun Sol KimDepartment of Animal Resources Science, Dankook University, Cheonan 31116, Korea.ORCID https://orcid.org/0000-0001-8801-421X
Jinho ChoDivision of Food and Animal Science, Chungbuk National University, Cheongju 28644, Korea.ORCID https://orcid.org/0000-0001-7151-0778
Minho SongDivision of Animal and Dairy Science, Chungnam National University, Daejeon 34134, Korea.ORCID https://orcid.org/0000-0002-4515-5212
Kwang Kyo OhMicrobial Safety Division, National Institute of Agricultural Sciences, Rural Development Administration, Wanju 55365, Korea.ORCID https://orcid.org/0000-0001-5300-2091
Jae Hyoung ChoDepartment of Animal Resources Science, Dankook University, Cheonan 31116, Korea.ORCID https://orcid.org/0000-0002-1128-3451
Sheena KimDepartment of Animal Resources Science, Dankook University, Cheonan 31116, Korea.ORCID https://orcid.org/0000-0002-5410-1347
Hyeri KimDepartment of Animal Resources Science, Dankook University, Cheonan 31116, Korea.ORCID https://orcid.org/0000-0002-6560-2390
Jinok KwakDepartment of Animal Resources Science, Dankook University, Cheonan 31116, Korea.ORCID https://orcid.org/0000-0003-1217-3569
Hyunok DooDepartment of Animal Resources Science, Dankook University, Cheonan 31116, Korea.ORCID https://orcid.org/0000-0003-4329-4128
Sriniwas PandeyDepartment of Animal Resources Science, Dankook University, Cheonan 31116, Korea.ORCID https://orcid.org/0000-0002-6947-3469
Hyeun Bum KimDepartment of Animal Resources Science, Dankook University, Cheonan 31116, Korea.ORCID https://orcid.org/0000-0003-1366-6090
Ju-Hoon LeeDepartment of Food Animal Biotechnology, Department of Agricultural Biotechnology, Center for Food and Bioconvergence, Seoul National University, Seoul 08826, Korea.ORCID https://orcid.org/0000-0003-0405-7621
Dankook University · KRSeoul National University · KRChungbuk National University · KRChungnam National University · KRRural Development Administration · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antibiotics have been used in livestock production for not only treatment but also for increasing the effectiveness of animal feed, aiding animal growth, and preventing infectious diseases at the time when immunity is lowered due to stress. South Korea and the EU are among the countries that have prohibited the use of antibiotics for growth promotion in order to prevent indiscriminate use of antibiotics, as previous studies have shown that it may lead to increase in cases of antibiotic-resistant bacteria. Therefore, this study evaluated the number of antibiotic resistance genes in piglets staging from pre-weaning to weaning. Fecal samples were collected from 8 piglets just prior to weaning (21 d of age) and again one week after weaning (28 d of age). Total DNA was extracted from the 200 mg of feces collected from the 8 piglets. Whole metagenome shotgun sequencing was carried out using the Illumina Hi-Seq 2000 platform and raw sequence data were imported to Metagenomics Rapid Annotation using Subsystem Technology (MG-RAST) pipeline for microbial functional analysis. The results of this study did not show an increase in antibiotic-resistant bacteria although confirmed an increase in antibiotic-resistant genes as the consequence of changes in diet and environment during the experiment.

Indexed as

Antibiotic resistancePigWhole metagenome shotgun sequencing

Identifiers

PMID37093913
PMCPMC10119475
OpenAlexW4312089553

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.