Evidence map›Paper›PMID 37085749›Full record

ArticleBMC plant biology2023

Altered profile of floral volatiles and lignin content by down-regulation of Caffeoyl Shikimate Esterase in Petunia.

Joo Young Kim, Keun Ho Cho, Shea A Keene, Thomas A Colquhoun

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

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  6. Mitigating Response ofPlants (Basel, Switzerland) · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Joo Young KimEnvironmental Horticulture Department, Plant Innovation Center, Institute of Food and Agricultural Sciences, University of Florida, 1529 Fifield Hall, Gainesville, FL, 32611, USA.
Keun Ho ChoHorticultural Sciences Department, Institute of Food and Agricultural Sciences, University of Florida, Gainesville, FL, 32611, USA.
Shea A KeeneEnvironmental Horticulture Department, Plant Innovation Center, Institute of Food and Agricultural Sciences, University of Florida, 1529 Fifield Hall, Gainesville, FL, 32611, USA.
Thomas A ColquhounEnvironmental Horticulture Department, Plant Innovation Center, Institute of Food and Agricultural Sciences, University of Florida, 1529 Fifield Hall, Gainesville, FL, 32611, USA. ucntcme1@ufl.edu.
University of Florida · US

Funding

Floriculture and Nursery Research Initiative (FNRI) P0096280
6 · The paper itself

Abstract

backgroundThe floral volatile profile of Petunia x hybrida 'Mitchell diploid' (MD) is dominated by phenylpropanoids, many of which are derived from p-coumaric acid. However, the downstream processes involved in the production of caffeoyl-CoA and feruloyl-CoA from p-coumaric acid are complex, as the genes and biosynthesis steps are associated with flavonoids and lignin synthesis as well as floral volatiles benzenoid/phenylpropanoid (FVBP). Caffeoyl shikimate esterase (CSE) converts caffeoyl shikimate to caffeic acid and is considered one of the essential regulators in lignin production. Moreover, CSE in involved in phenylpropanoid production. To investigate the roles of CSE in FVBP biosynthesis, we used RNAi-mediated CSE down-regulated (ir-PhCSE) petunias.

resultsLowered CSE transcript accumulation in ir-PhCSE plants resulted in reduced lignin layers in the stems and stunted growth, suggesting a positive correlation between lignin layers and lignin content. The altered CSE level influenced the expression of many FVBP genes, including elevated transcripts of p-coumarate-3-hydroxylase (C3H), hydroxycinnamoyl transferase (HCT), and 4-coumaric acid: CoA ligase (4CL). In particular, the expression of C4H in ir-PhCSE plants was more than twice the expression in MD plants. Moreover, the production of volatile compounds was alterend in ir-PhCSE plants. Most floral volatiles decreased, and the amounts of phenylalanine and caffeic acid were significantly lower.

conclusionsReduced lignin layers in the stems and stunted growth in ir-PhCSE plants suggest that PhCSE is essential for lignin production and plant growth in petunia. The decreased CSE level influenced the expression of many FVBP genes, and interference of shikimate derivates altered volatile compound production. Significantly decreased caffeic acid, but not ferulic acid, in ir-PhCSE plants suggest that CSE is primarily involved in the reaction of caffeoyl shikimate. Higher C3H and C4H transcripts seem to alleviate accumulated p-coumaric acid resulting from altered CSE. Finally, alteration in C3H, HCT, and 4CL in CSE down-regulated plants suggests an interaction of the FVBP genes, leading to the regulation of floral volatiles of petunia.

Indexed as

EsterasesPetuniaCaffeic AcidsCoumaric AcidsDown-RegulationGene Expression Regulation, PlantLigninMixed Function OxygenasesPlant ProteinsShikimic Acidcaffeic acidCaffeic AcidsCoumaric AcidsEsterasesLigninMixed Function Oxygenasesp-coumaric acidPlant ProteinsshikimateShikimic AcidCaffeoyl shikimate esteraseCSELigninPetuniaPhenylpropanoidsVolatiles

Identifiers

PMID37085749
PMCPMC10122356
OpenAlexW4366769888

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.