Evidence map›Paper›PMID 37085268›Full record

ArticleJournal of animal science2023

Comprehensive RNA-seq profiling to evaluate the rabbit mammary gland transcriptome after mastitis.

Yingjie Wu, Lihua Zhao, Yinghe Qin

Open access · greenAbstract read
In one paragraph

Article in Journal of animal science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Yingjie WuDepartment of Intelligent Breeding and Environmental Science, College of Animal Science and Technology, China Agricultural University, Beijing 100193, P.R. China.ORCID 0000-0003-2675-2625
Lihua ZhaoDepartment of Intelligent Breeding and Environmental Science, College of Animal Science and Technology, China Agricultural University, Beijing 100193, P.R. China.
Yinghe QinDepartment of Intelligent Breeding and Environmental Science, College of Animal Science and Technology, China Agricultural University, Beijing 100193, P.R. China.ORCID 0000-0001-6991-2284
China Agricultural University · CN

Funding

Major Research Development Program of Xinjiang Uygur Autonomous Region 2020B01004Major Scientific and Technological ProjectsNew Agricultural Varieties in Zhejiang Province 2021c02068-7
6 · The paper itself

Abstract

Mastitis is a relatively common disease in rabbit does. The aim of this study was to investigate a relationship between the severity of clinical signs and pathological observations and to analyze differentially expressed genes (DEGs) in the mammary gland with mastitis versus healthy mammary gland. The result showed that rectal temperatures of the rabbits with both mild mastitis and severe mastitis were higher than that of control. Cell counting results showed that the somatic cell count (SCC) only in milk of the rabbit with severe mastitis was significantly higher than that in the control group. However, the number of heterophils in the histological sections of mammary glands with mild mastitis was significantly higher than that of control. A total of 1,096 DEGs between the control and mastitis mammary glands was identified by RNA-sequencing (RNA-seq). Gene ontology (GO) showed that most of up-regulated genes were enriched in terms such as response to stimulus, signal transduction, and cell communication. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis revealed that these genes were mostly enriched in the pathways such as Rap1 signaling pathway, proteoglycans in cancer, and PI3K-Akt signaling pathway. However, the downregulated genes were mainly enriched in metabolic processes and significantly involved in metabolic pathways. The data provides useful information to further dissect the molecular genetic mechanisms underlying rabbit mastitis, which is a prerequisite for designing effective intervention strategies.

Indexed as

MastitisTranscriptomeAnimalsFemaleGene Expression ProfilingPhosphatidylinositol 3-KinasesRabbitsRNA-SeqPhosphatidylinositol 3-KinasesmastitisrabbitRNA-sequencingsomatic cell count

Identifiers

PMID37085268
PMCPMC10205460
OpenAlexW4366605309

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.