Evidence map›Paper›PMID 37084155›Full record

ArticleBreast cancer research and treatment2023

Identification of genetic and immune signatures for the recurrence of HER2-positive breast cancer after trastuzumab-based treatment.

Chi Xu, Yahui Wang, Yuanyuan Hong, Ru Yao, Lijia Wu, Xi Shen, Yang Qu, Zhuo Zhang, Wei Zhu, Ying Yang and 3 more

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Article in Breast cancer research and treatment, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Chi Xu *Department of Breast Surgery, Peking Union Medical College Hospital, Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Yahui Wang *Genecast Biotechnology Co., Ltd, Wuxi, Jiangsu, China.
Yuanyuan HongGenecast Biotechnology Co., Ltd, Wuxi, Jiangsu, China.
Ru YaoDepartment of Breast Surgery, Peking Union Medical College Hospital, Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Lijia WuGenecast Biotechnology Co., Ltd, Wuxi, Jiangsu, China.
Xi ShenDepartment of Breast Surgery, Peking Union Medical College Hospital, Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Yang QuDepartment of Breast Surgery, Peking Union Medical College Hospital, Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Zhuo ZhangGenecast Biotechnology Co., Ltd, Wuxi, Jiangsu, China.
Wei ZhuGenecast Biotechnology Co., Ltd, Wuxi, Jiangsu, China.
Ying YangGenecast Biotechnology Co., Ltd, Wuxi, Jiangsu, China.
Weizhi ChenGenecast Biotechnology Co., Ltd, Wuxi, Jiangsu, China.
Yidong ZhouDepartment of Breast Surgery, Peking Union Medical College Hospital, Academy of Medical Sciences and Peking Union Medical College, Beijing, China. zhouydpumch@126.com.ORCID http://orcid.org/0000-0002-4439-1117
Zhiyong LiangDepartment of Pathology, Peking Union Medical College Hospital, Academy of Medical Sciences and Peking Union Medical College, Beijing, China. liangzy@pumch.cn.
Genecast (China) · CNChinese Academy of Medical Sciences & Peking Union Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeTo determine the genetic and immune features associated with the recurrence of human epidermal growth factor receptor2-positive (HER2 +) breast cancer (BC) after trastuzumab-based treatment.

methodsA retrospective cohort study of 48 patients who received trastuzumab-based treatment was divided into recurrent and non-recurrent groups according to clinical follow-up. Baseline samples from all 48 patients were analyzed for genetic variation, HLA allele type, gene expression, and immune features, which were linked to HER2 + BC recurrence. Statistics included logistic regression models, Kaplan-Meier plots, and Univariate Cox proportional hazards models.

resultsCompared with the non-recurrent group, the extracellular matrix-related pathway and 3 Hallmark gene sets were enriched in the recurrent group. The infiltration levels of immature B cells and activated B cells were significantly increased in the non-recurrent group, which correlated remarkably with improved overall survival (OS) in two other published gene expression datasets, including TCGA and METABRIC. In the TCGA cohort (n = 275), activated B cells (HR 0.23, 95%CI 0.13-0.43, p < 0.0001), and immature B cells (HR 0.26, 95%CI 0.12-0.59, p < 0.0001). In the METABRIC cohort (n = 236), activated B cells (HR 0.60, 95%CI 0.43-0.83, p = 0.002), and immature B cells (HR 0.65, 95%CI 0.47-0.91, p = 0.011). Cox regression suggested that immature B cells and activated B cells were protective factors for outcome OS.

conclusionsAberrant activation of multiple pathways and low baseline tumor-infiltrating B cells are related to HER2 + BC trastuzumab-based recurrence, which primarily affects the antitumor activity of trastuzumab.

Indexed as

Breast NeoplasmsBiomarkers, TumorDisease-Free SurvivalErb-b2 Receptor Tyrosine KinasesFemaleHumansPrognosisRetrospective StudiesTrastuzumabTreatment OutcomeBiomarkers, TumorErb-b2 Receptor Tyrosine KinasesTrastuzumabHER2-positive breast cancerInnate anti-PD-1 resistance signatureRecurrenceTrastuzumabTumor-infiltrating B cells

Identifiers

PMID37084155
OpenAlexW4366603515

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.