Evidence map›Paper›PMID 37081391›Full record

ArticleBMC plant biology2023

Steroidal saponin profiles and their key genes for synthesis and regulation in Asparagus officinalis L. by joint analysis of metabolomics and transcriptomics.

Qin Cheng, Liangqin Zeng, Hao Wen, Sylvia E Brown, He Wu, Xingyu Li, Chun Lin, Zhengjie Liu, Zichao Mao

Abstract read
In one paragraph

Article in BMC plant biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. The Identification ofPlants (Basel, Switzerland) · 2024
    Article
  4. Profiles of phenolics and their synthetic pathways inFood chemistry. Molecular sciences · 2024
    Article
  5. Article
  6. Article
  7. Article
4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Qin ChengCollege of Agronomy and Biotechnology, Yunnan Agricultural University (YNAU), Kunming, 650201, Yunnan, China.
Liangqin ZengCollege of Agronomy and Biotechnology, Yunnan Agricultural University (YNAU), Kunming, 650201, Yunnan, China.
Hao WenCollege of Agronomy and Biotechnology, Yunnan Agricultural University (YNAU), Kunming, 650201, Yunnan, China.
Sylvia E BrownCollege of Agronomy and Biotechnology, Yunnan Agricultural University (YNAU), Kunming, 650201, Yunnan, China.
He WuCollege of Agronomy and Biotechnology, Yunnan Agricultural University (YNAU), Kunming, 650201, Yunnan, China.
Xingyu LiInstitute of Improvement and Utilization of Characteristic Resource Plants, YNAU, Kunming, China.
Chun LinCollege of Agronomy and Biotechnology, Yunnan Agricultural University (YNAU), Kunming, 650201, Yunnan, China.
Zhengjie LiuCollege of Agronomy and Biotechnology, Yunnan Agricultural University (YNAU), Kunming, 650201, Yunnan, China. lzj1022@163.com.
Zichao MaoCollege of Agronomy and Biotechnology, Yunnan Agricultural University (YNAU), Kunming, 650201, Yunnan, China. zmao@ynau.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAsparagus officinalis L. is a worldwide cultivated vegetable enrichened in both nutrient and steroidal saponins with multiple pharmacological activities. The upstream biosynthetic pathway of steroidal saponins (USSP) for cholesterol (CHOL) synthesis has been studied, while the downstream pathway of steroidal saponins (DSSP) starting from cholesterol and its regulation in asparagus remains unknown.

resultsMetabolomics, Illumina RNAseq, and PacBio IsoSeq strategies were applied to different organs of both cultivated green and purple asparagus to detect the steroidal metabolite profiles & contents and to screen their key genes for biosynthesis and regulation. The results showed that there is a total of 427 compounds, among which 18 steroids were detected with fluctuated concentrations in roots, spears and flowering twigs of two garden asparagus cultivars. The key genes of DSSP include; steroid-16-hydroxylase (S16H), steroid-22-hydroxylase (S22H) and steroid-22-oxidase-16-hydroxylase (S22O-16H), steroid-26-hydroxylase (S26H), steroid-3-β-glycosyltransferase (S3βGT) and furostanol glycoside 26-O-beta-glucosidases (F26GHs) which were correlated with the contents of major steroidal saponins were screened, and the transcriptional factors (TFs) co-expressing with the resulted from synthetic key genes, including zinc fingers (ZFs), MYBs and WRKYs family genes were also screened.

conclusionsBased on the detected steroidal chemical structures, profiles and contents which correlated to the expressions of screened synthetic and TFs genes, the full steroidal saponin synthetic pathway (SSP) of asparagus, including its key regulation networks was proposed for the first time.

Indexed as

Asparagus PlantSaponinsMetabolomicsMixed Function OxygenasesSteroidsTranscriptomeVegetablesMixed Function OxygenasesSaponinsSteroidsAsparagus officinalisMetabolomicsSteroidal saponins biosynthesisTranscriptomics

Identifiers

PMID37081391
PMCPMC10116787

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