Evidence map›Paper›PMID 37080979›Full record

ReviewEmerging infectious diseases2023

Phylogenetic Analysis of Transmission Dynamics of Dengue in Large and Small Population Centers, Northern Ecuador.

Sully Márquez, Gwenyth Lee, Bernardo Gutiérrez, Shannon Bennett, Josefina Coloma, Joseph N S Eisenberg, Gabriel Trueba

Open access · diamondAbstract readReview
In one paragraph

Review in Emerging infectious diseases, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

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  7. Whole Genome Sequencing of DENV-2 isolated frombioRxiv : the preprint server for biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sully Márquez
Gwenyth Lee
Bernardo Gutiérrez
Shannon Bennett
Josefina Coloma
Joseph N S Eisenberg
Gabriel Trueba

Funding

American Asian Centers for Arbovirus Research and Enhanced Surveillance (A2CARES)U01AI151788 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI Josefina Coloma, Eva Harris · 2020 to 2026
$9.6M
Zika and Dengue Co-circulation Under Environmental Change and UrbanizationR01AI132372 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI COLOMA, JOSEFINA, EISENBERG, JOSEPH N. S. · 2017 to 2020
$2.9M
NIAID NIH HHS R01 AI132372NIAID NIH HHS U01 AI151788
6 · The paper itself

Abstract

Although dengue is typically considered an urban disease, rural communities are also at high risk. To clarify dynamics of dengue virus (DENV) transmission in settings with characteristics generally considered rural (e.g., lower population density, remoteness), we conducted a phylogenetic analysis in 6 communities in northwestern Ecuador. DENV RNA was detected by PCR in 121/488 serum samples collected from febrile case-patients during 2019-2021. Phylogenetic analysis of 27 samples from Ecuador and other countries in South America confirmed that DENV-1 circulated during May 2019-March 2020 and DENV-2 circulated during December 2020-July 2021. Combining locality and isolation dates, we found strong evidence that DENV entered Ecuador through the northern province of Esmeraldas. Phylogenetic patterns suggest that, within this province, communities with larger populations and commercial centers were more often the source of DENV but that smaller, remote communities also play a role in regional transmission dynamics.

Indexed as

DengueDengue VirusEcuadorHumansPhylogenySouth AmericaDenguedengue virusEcuadorphylogeneticsremotenesstransmissionurbanvector-borne infectionsviruseswhole-genome sequencing

Identifiers

PMID37080979
PMCPMC10124659
OpenAlexW4365140367

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.