Evidence map›Paper›PMID 37077976›Full record

ArticleQuantitative plant biology2022

Temporal and spatial auxin responsive networks in maize primary roots.

Maxwell R McReynolds, Linkan Dash, Christian Montes, Melissa A Draves, Michelle G Lang, Justin W Walley, Dior R Kelley

Open access · goldAbstract read
In one paragraph

Article in Quantitative plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. ZmPILS6 is an auxin efflux carrier required for maize root morphogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Roles of auxin pathways in maize biology.Journal of experimental botany · 2023
    Review
  5. Auxin as an architect of the pectin matrix.Journal of experimental botany · 2023
    Review
  6. A Practical Guide to Inferring Multi-Omics Networks in Plant Systems.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Maxwell R McReynoldsDepartment of Plant Pathology and Microbiology, Iowa State University, Ames, Iowa 50011, USA.ORCID https://orcid.org/0000-0001-7984-9397
Linkan DashDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, Iowa 50011, USA.ORCID https://orcid.org/0000-0003-4843-8653
Christian MontesDepartment of Plant Pathology and Microbiology, Iowa State University, Ames, Iowa 50011, USA.ORCID https://orcid.org/0000-0003-1249-2308
Melissa A DravesDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, Iowa 50011, USA.ORCID https://orcid.org/0000-0002-1668-2822
Michelle G LangDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, Iowa 50011, USA.ORCID https://orcid.org/0000-0002-4405-5092
Justin W WalleyDepartment of Plant Pathology and Microbiology, Iowa State University, Ames, Iowa 50011, USA.ORCID https://orcid.org/0000-0001-7553-2237
Dior R KelleyDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, Iowa 50011, USA.ORCID https://orcid.org/0000-0001-9186-4186
Iowa State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Auxin is a key regulator of root morphogenesis across angiosperms. To better understand auxin-regulated networks underlying maize root development, we have characterized auxin-responsive transcription across two time points (30 and 120 min) and four regions of the primary root: the meristematic zone, elongation zone, cortex and stele. Hundreds of auxin-regulated genes involved in diverse biological processes were quantified in these different root regions. In general, most auxin-regulated genes are region unique and are predominantly observed in differentiated tissues compared with the root meristem. Auxin gene regulatory networks were reconstructed with these data to identify key transcription factors that may underlie auxin responses in maize roots. Additionally, Auxin-Response Factor subnetworks were generated to identify target genes that exhibit tissue or temporal specificity in response to auxin. These networks describe novel molecular connections underlying maize root development and provide a foundation for functional genomic studies in a key crop.

Indexed as

auxinco-expressiongene regulationmaizenetworksroots

Identifiers

PMID37077976
PMCPMC10095944
OpenAlexW4312991116

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.