Evidence map›Paper›PMID 37077206›Full record

ArticleQuantitative plant biology2021

Comparative transcriptomics reveals desynchronisation of gene expression during the floral transition between Arabidopsis and

Alexander Calderwood, Jo Hepworth, Shannon Woodhouse, Lorelei Bilham, D Marc Jones, Eleri Tudor, Mubarak Ali, Caroline Dean, Rachel Wells, Judith A Irwin and 1 more

Abstract read
In one paragraph

Article in Quantitative plant biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Alexander CalderwoodDepartment of Computational and Systems Biology, John Innes Centre, Norwich, United Kingdom.
Jo HepworthDepartment of Crop Genetics, John Innes Centre, Norwich, United Kingdom.ORCID https://orcid.org/0000-0002-4621-8414
Shannon WoodhouseDepartment of Computational and Systems Biology, John Innes Centre, Norwich, United Kingdom.ORCID https://orcid.org/0000-0001-8048-9536
Lorelei BilhamDepartment of Crop Genetics, John Innes Centre, Norwich, United Kingdom.
D Marc JonesDepartment of Computational and Systems Biology, John Innes Centre, Norwich, United Kingdom.ORCID https://orcid.org/0000-0003-3167-2590
Eleri TudorDepartment of Crop Genetics, John Innes Centre, Norwich, United Kingdom.
Mubarak AliBangladesh Agricultural Research Institute, Gazipur, Bangladesh.
Caroline DeanDepartment of Cell and Developmental Biology, John Innes Centre, Norwich, United Kingdom.ORCID https://orcid.org/0000-0002-6555-3525
Rachel WellsDepartment of Crop Genetics, John Innes Centre, Norwich, United Kingdom.ORCID https://orcid.org/0000-0002-1280-7472
Judith A IrwinDepartment of Crop Genetics, John Innes Centre, Norwich, United Kingdom.
Richard J MorrisDepartment of Computational and Systems Biology, John Innes Centre, Norwich, United Kingdom.ORCID https://orcid.org/0000-0003-3080-2613

Funding

Biotechnology and Biological Sciences Research Council BBS/E/J/00000581Biotechnology and Biological Sciences Research Council BBS/E/J/00000611Biotechnology and Biological Sciences Research Council BBS/E/J/000PR9788
6 · The paper itself

Abstract

Comparative transcriptomics can be used to translate an understanding of gene regulatory networks from model systems to less studied species. Here, we use RNA-Seq to determine and compare gene expression dynamics through the floral transition in the model species

Indexed as

ArabidopsisBrassica rapacomparative transcriptomicsfloweringFTSOC1

Identifiers

PMID37077206
PMCPMC10095958

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.