Evidence map›Paper›PMID 37076483›Full record

ArticleCell death & disease2023

Plasma metabolomic characterization of SARS-CoV-2 Omicron infection.

Xue Li, Yimeng Liu, Guiying Xu, Yi Xie, Ximo Wang, Junping Wu, Huaiyong Chen

Open access · goldAbstract read
In one paragraph

Article in Cell death & disease, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
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  5. Observational
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  10. LongitudinalViruses · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Xue Li *Department of Basic Medicine, Haihe Clinical School, Tianjin Medical University, Tianjin, 300350, China.ORCID 0000-0003-3040-7912
Yimeng Liu *Department of Basic Medicine, Haihe Clinical School, Tianjin Medical University, Tianjin, 300350, China.ORCID 0000-0002-4105-8431
Guiying XuDepartment of Basic Medicine, Haihe Clinical School, Tianjin Medical University, Tianjin, 300350, China.ORCID 0000-0001-5137-7957
Yi XieTianjin Key Laboratory of Lung Regenerative Medicine, Tianjin, 300350, China.ORCID 0000-0002-5672-3158
Ximo WangTianjin Key Laboratory of Lung Regenerative Medicine, Tianjin, 300350, China. wangximo@126.com.
Junping WuTianjin Key Laboratory of Lung Regenerative Medicine, Tianjin, 300350, China. wujp0618@126.com.ORCID 0000-0002-4556-7727
Huaiyong ChenDepartment of Basic Medicine, Haihe Clinical School, Tianjin Medical University, Tianjin, 300350, China. huaiyong.chen@foxmail.com.ORCID 0000-0002-1201-0535
Tianjin Medical University · CNTianjin University · CNTianjin University of Traditional Chinese Medicine · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Omicron variants of SARS-CoV-2 have spread rapidly worldwide; however, most infected patients have mild or no symptoms. This study aimed to understand the host response to Omicron infections by performing metabolomic profiling of plasma. We observed that Omicron infections triggered an inflammatory response and innate immune, and adaptive immunity was suppressed, including reduced T-cell response and immunoglobulin antibody production. Similar to the original SARS-CoV-2 strain circulating in 2019, the host developed an anti-inflammatory response and accelerated energy metabolism in response to Omicron infection. However, differential regulation of macrophage polarization and reduced neutrophil function has been observed in Omicron infections. Interferon-induced antiviral immunity was not as strong in Omicron infections as in the original SARS-CoV-2 infections. The host response to Omicron infections increased antioxidant capacity and liver detoxification more than in the original strain. Hence, these findings suggest that Omicron infections cause weaker inflammatory alterations and immune responses than the original SARS-CoV-2 strain.

Indexed as

COVID-19Adaptive ImmunityAntibodiesHumansSARS-CoV-2Antibodies

Identifiers

PMID37076483
PMCPMC10113737
OpenAlexW4366393044

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.