Evidence map›Paper›PMID 37075125›Full record

ArticleScience advances2023

RNA binding induces an allosteric switch in Cyp33 to repress MLL1-mediated transcription.

Markus Blatter, Charlotte Meylan, Antoine Cléry, Roberto Giambruno, Yaroslav Nikolaev, Michel Heidecker, Jessica Arvindbhai Solanki, Manuel O Diaz, Davide Gabellini, Frédéric H-T Allain

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. The isolated HEPN domain of SACSIN exhibits RNA-binding activity.Cellular and molecular life sciences : CMLS · 2026
    Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Markus BlatterDepartment of Biology, Institute of Biochemistry, ETH Zurich, 8093 Zurich, Switzerland.ORCID 0000-0002-3643-9926
Charlotte MeylanDepartment of Biology, Institute of Biochemistry, ETH Zurich, 8093 Zurich, Switzerland.ORCID 0000-0002-6982-8135
Antoine CléryDepartment of Biology, Institute of Biochemistry, ETH Zurich, 8093 Zurich, Switzerland.ORCID 0000-0002-4550-6908
Roberto GiambrunoGene Expression and Muscular Dystrophy Unit, Division of Genetics and Cell Biology, IRCCS San Raffaele Scientific Institute, Milan 20132, Italy.ORCID 0000-0002-4566-261X
Yaroslav NikolaevDepartment of Biology, Institute of Biochemistry, ETH Zurich, 8093 Zurich, Switzerland.ORCID 0000-0002-1479-7474
Michel HeideckerDepartment of Biology, Institute of Biochemistry, ETH Zurich, 8093 Zurich, Switzerland.ORCID 0000-0002-3502-8607
Jessica Arvindbhai SolankiDepartment of Microbiology and Immunology, Stritch School of Medicine, Loyola University of Chicago Medical Center, University of Chicago, Chicago, IL, USA.
Manuel O DiazDepartment of Microbiology and Immunology, Stritch School of Medicine, Loyola University of Chicago Medical Center, University of Chicago, Chicago, IL, USA.ORCID 0000-0003-2183-1535
Davide GabelliniGene Expression and Muscular Dystrophy Unit, Division of Genetics and Cell Biology, IRCCS San Raffaele Scientific Institute, Milan 20132, Italy.ORCID 0000-0002-3811-4121
Frédéric H-T AllainDepartment of Biology, Institute of Biochemistry, ETH Zurich, 8093 Zurich, Switzerland.ORCID 0000-0002-2131-6237
ETH Zurich · CHLoyola University Chicago · USVita-Salute San Raffaele University · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mixed-lineage leukemia 1 (MLL1) is a transcription activator of the HOX family, which binds to specific epigenetic marks on histone H3 through its third plant homeodomain (PHD3) domain. Through an unknown mechanism, MLL1 activity is repressed by cyclophilin 33 (Cyp33), which binds to MLL1 PHD3. We determined solution structures of Cyp33 RNA recognition motif (RRM) free, bound to RNA, to MLL1 PHD3, and to both MLL1 and the histone H3 lysine N6-trimethylated. We found that a conserved α helix, amino-terminal to the RRM domain, adopts three different positions facilitating a cascade of binding events. These conformational changes are triggered by Cyp33 RNA binding and ultimately lead to MLL1 release from the histone mark. Together, our mechanistic findings rationalize how Cyp33 binding to MLL1 can switch chromatin to a transcriptional repressive state triggered by RNA binding as a negative feedback loop.

Indexed as

HistonesLeukemiaDNA-Binding ProteinsHistone-Lysine N-MethyltransferaseHumansMyeloid-Lymphoid Leukemia ProteinRNADNA-Binding ProteinsHistone-Lysine N-MethyltransferaseHistonesMyeloid-Lymphoid Leukemia ProteinRNA

Identifiers

PMID37075125
PMCPMC10115415
OpenAlexW4366382685

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.