Evidence map›Paper›PMID 37072750›Full record

ArticleBMC cancer2023

Identification of immunotherapy-related lncRNA signature for predicting prognosis, immunotherapy responses and drug candidates in bladder cancer.

Pengyu Hui, Feng Ni, Liang Zheng, Lei Jia, Zhe Wang

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 10 citations in OpenAlex.

  1. Pooled it
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  7. Enhancing mHeliyon · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Pengyu HuiDepartment of Urology, The Second Affiliated Hospital of Xi'an Medical University, No.167 Fangzhicheng East Road, Baqiao District, Xi'an, Shaanxi, 710038, China.
Feng NiDepartment of Urology, The Second Affiliated Hospital of Xi'an Medical University, No.167 Fangzhicheng East Road, Baqiao District, Xi'an, Shaanxi, 710038, China.
Liang ZhengDepartment of Urology, The Second Affiliated Hospital of Xi'an Medical University, No.167 Fangzhicheng East Road, Baqiao District, Xi'an, Shaanxi, 710038, China.
Lei JiaDepartment of Urology, The Second Affiliated Hospital of Xi'an Medical University, No.167 Fangzhicheng East Road, Baqiao District, Xi'an, Shaanxi, 710038, China.
Zhe WangDepartment of Urology, Cancer Hospital of China Medical University, No.44 Xiaoheyan Road, Dadong District, Shenyang, 110042, Liaoning, China. jiji2811545@163.com.
Xi'an Medical University · CNChina Medical University · CN

Funding

Xian Municipal Bureau of Science and Technology Foundation 22YXYJ0121
6 · The paper itself

Abstract

backgroundBladder cancer (BC) is one of the most common malignant diseases and the most common causes of cancer death worldwide. Immunotherapy has opened new avenues for precision treatment of bladder tumours, and immune checkpoint inhibitors (ICIs) have revolutionized the clinical treatment strategy of bladder tumours. In addition, long non-coding RNA (lncRNA) plays an important role in regulating tumour development and immunotherapy efficacy.

methodsWe obtained genes with significant differences between anti-PD-L1 response and non-response from the Imvogor210 data set and combined with the bladder cancer expression data in the TCGA cohort to obtain immunotherapy-related lncRNA. Based on these lncRNAs, the prognostic risk model of bladder cancer was constructed and verified by GEO external data set. The characterization of immune cell infiltration and immunotherapy effects between high-risk and low-risk groups were then analysed. We predicted the ceRNA network and performed molecular docking of key target proteins. The functional experiments verified the function of SBF2-AS1.

resultsThree immunotherapy-related lncRNAs were identified as independent prognostic biomarkers for bladder cancer and a prognostic model of immunotherapy-related prognosis was constructed. Prognosis, immune cell infiltration, and immunotherapy efficacy were significantly different between high- and low-risk groups based on risk scores. Additionally, we established a ceRNA network of lncRNA(SBF2-AS1)-miRNA(has-miR-582-5p)-mRNA (HNRNPA2B1). Targeting the protein HNRNPA2B1 identified the top eight small molecule drugs with the highest affinity.

conclusionWe developed a prognostic risk score model based on immune-therapy-related lncRNA, which was subsequently determined to be significantly associated with immune cell infiltration and immunotherapy response. This study not only helps to promote our understanding of immunotherapy-related lncRNA in the prognosis of BC, but also provides new ideas for clinical immunotherapy and the development of novel therapeutic drugs for patients.

Indexed as

MicroRNAsRNA, Long NoncodingUrinary Bladder NeoplasmsHumansImmunotherapyMolecular Docking SimulationPrognosisMicroRNAsMIRN582 microRNA, humanRNA, Long NoncodingBladder cancerceRNA networkImmunotherapyLong non-coding RNAMolecular dockingPrognostic

Identifiers

PMID37072750
PMCPMC10111848
OpenAlexW4366293297

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.