Evidence map›Paper›PMID 37072508›Full record

ArticleScientific reports2023

Mechanisms of length-dependent recognition of viral double-stranded RNA by RIG-I.

Jung Hyun Im, Ivana Duic, Shige H Yoshimura, Koji Onomoto, Mitsutoshi Yoneyama, Hiroki Kato, Takashi Fujita

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

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  14. Transcriptome and proteomic analysis of mpox virus F3L-expressing cells.Frontiers in cellular and infection microbiology · 2024
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Jung Hyun ImDivision of Integrated Life Science, Graduate School of Biostudies, Kyoto University, Kyoto, 606-8501, Japan.
Ivana DuicDivision of Integrated Life Science, Graduate School of Biostudies, Kyoto University, Kyoto, 606-8501, Japan.
Shige H YoshimuraDivision of Integrated Life Science, Graduate School of Biostudies, Kyoto University, Kyoto, 606-8501, Japan.
Koji OnomotoDivision of Molecular Immunology, Medical Mycology Research Center, Chiba University, Chiba, 260-8673, Japan.
Mitsutoshi YoneyamaDivision of Molecular Immunology, Medical Mycology Research Center, Chiba University, Chiba, 260-8673, Japan.
Hiroki KatoInstitute for Cardiovascular Immunology, University Hospital Bonn, Bonn, 53127, Germany.
Takashi FujitaDivision of Integrated Life Science, Graduate School of Biostudies, Kyoto University, Kyoto, 606-8501, Japan. fujita.takashi.86e@st.kyoto-u.ac.jp.
Kyoto University · JPChiba Institute of Science · JPChiba University · JPUniversity Hospital Bonn · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Retinoic acid-inducible gene I (RIG-I) is the most front-line cytoplasmic viral RNA sensor and induces antiviral immune responses. RIG-I recognizes short double-stranded (dsRNA) (< 500 bp), but not long dsRNA (> 500 bp) to trigger antiviral signaling. Since RIG-I is capable of binding with dsRNA irrespective of size, length-dependent RIG-I signaling remains elusive. Here, we demonstrated that RIG-I bound to long dsRNA with slow kinetics. Remarkably, RIG-I/short dsRNA complex efficiently dissociated in an ATP hydrolysis-dependent manner, whereas RIG-I/long dsRNA was stable and did not dissociate. Our study suggests that the dissociation of RIG-I from RIG-I/dsRNA complex could be a step for efficient antiviral signaling. Dissociated RIG-I exhibited homo-oligomerization, acquiring ability to physically associate with MAVS, and biological activity upon introduction into living cells. We herein discuss common and unique mechanisms of viral dsRNA recognition by RIG-I and MDA5.

Indexed as

DEAD-box RNA HelicasesRNA, Double-StrandedDEAD Box Protein 58HumansInterferon-Induced Helicase, IFIH1RNA, ViralSignal TransductionDEAD Box Protein 58DEAD-box RNA HelicasesInterferon-Induced Helicase, IFIH1RNA, Double-StrandedRNA, Viral

Identifiers

PMID37072508
PMCPMC10113236
OpenAlexW4366272345

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.