Evidence map›Paper›PMID 37072228›Full record

ArticleGenes & development2023

A change in biophysical properties accompanies heterochromatin formation in mouse embryos.

Manuel Guthmann, Chen Qian, Irene Gialdini, Tsunetoshi Nakatani, Andreas Ettinger, Tamas Schauer, Igor Kukhtevich, Robert Schneider, Don C Lamb, Adam Burton and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. The rebirth of repressive chromatin during early vertebrate development.Annals of the New York Academy of Sciences · 2025
    Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Manuel GuthmannInstitute of Epigenetics and Stem Cells (IES), Helmholtz Zentrum München, D-81377 München, Germany.
Chen QianDepartment of Chemistry, Center for NanoScience (CeNS), Ludwig Maximilians-Universität München, 81377 München, Germany.
Irene GialdiniDepartment of Chemistry, Center for NanoScience (CeNS), Ludwig Maximilians-Universität München, 81377 München, Germany.
Tsunetoshi NakataniInstitute of Epigenetics and Stem Cells (IES), Helmholtz Zentrum München, D-81377 München, Germany.
Andreas EttingerInstitute of Epigenetics and Stem Cells (IES), Helmholtz Zentrum München, D-81377 München, Germany.
Tamas SchauerInstitute of Epigenetics and Stem Cells (IES), Helmholtz Zentrum München, D-81377 München, Germany.
Igor KukhtevichInstitute of Functional Epigenetics (IFE), Helmholtz Zentrum München, D-85764 Neuherberg, Germany.
Robert SchneiderInstitute of Functional Epigenetics (IFE), Helmholtz Zentrum München, D-85764 Neuherberg, Germany.
Don C LambDepartment of Chemistry, Center for NanoScience (CeNS), Ludwig Maximilians-Universität München, 81377 München, Germany.
Adam BurtonInstitute of Epigenetics and Stem Cells (IES), Helmholtz Zentrum München, D-81377 München, Germany.
Maria-Elena Torres-PadillaInstitute of Epigenetics and Stem Cells (IES), Helmholtz Zentrum München, D-81377 München, Germany; torres-padilla@helmholtz-muenchen.de.
Helmholtz Zentrum München · DECenter for NanoScience · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The majority of our genome is composed of repeated DNA sequences that assemble into heterochromatin, a highly compacted structure that constrains their mutational potential. How heterochromatin forms during development and how its structure is maintained are not fully understood. Here, we show that mouse heterochromatin phase-separates after fertilization, during the earliest stages of mammalian embryogenesis. Using high-resolution quantitative imaging and molecular biology approaches, we show that pericentromeric heterochromatin displays properties consistent with a liquid-like state at the two-cell stage, which change at the four-cell stage, when chromocenters mature and heterochromatin becomes silent. Disrupting the condensates results in altered transcript levels of pericentromeric heterochromatin, suggesting a functional role for phase separation in heterochromatin function. Thus, our work shows that mouse heterochromatin forms membrane-less compartments with biophysical properties that change during development and provides new insights into the self-organization of chromatin domains during mammalian embryogenesis.

Indexed as

ChromatinHeterochromatinAnimalsEmbryo, MammalianGenomeMammalsMiceChromatinHeterochromatinembryoheterochromatinimaging

Identifiers

PMID37072228
PMCPMC10153458
OpenAlexW4366248379

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.