Evidence map›Paper›PMID 37071799›Full record

ArticleAnalytical chemistry2023

Assessing Breast Cancer Molecular Subtypes Using Extracellular Vesicles' mRNA.

Mengjia Hu, Virginia Brown, Joshua M Jackson, Harshani Wijerathne, Harsh Pathak, Devin C Koestler, Emily Nissen, Mateusz L Hupert, Rolf Muller, Andrew K Godwin and 2 more

Open access · greenAbstract read
In one paragraph

Article in Analytical chemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
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  11. Extracellular Vesicle Preparation and Analysis: A State-of-the-Art Review.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Review
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Mengjia HuDepartment of Cancer Biology, The University of Kansas Medical Center, Cancer Center, Kansas City, Kansas 66160, United States.
Virginia BrownCenter of BioModular Multi-Scale Systems for Precision Medicine, The University of Kansas, Lawrence, Kansas 66045, United States.
Joshua M JacksonCenter of BioModular Multi-Scale Systems for Precision Medicine, The University of Kansas, Lawrence, Kansas 66045, United States.
Harshani WijerathneCenter of BioModular Multi-Scale Systems for Precision Medicine, The University of Kansas, Lawrence, Kansas 66045, United States.
Harsh PathakDepartment of Pathology and Laboratory Medicine, University of Kansas Medical Center, Kansas City, Kansas 66160, United States.
Devin C KoestlerKansas Institute for Precision Medicine, University of Kansas Medical Center, Kansas City, Kansas 66160, United States.
Emily NissenDepartment of Biostatistics & Data Science, The University of Kansas Medical Center, Kansas City, Kansas 66160, United States.
Mateusz L HupertBioFluidica, Inc., San Diego, California 92121, United States.
Rolf MullerBioFluidica, Inc., San Diego, California 92121, United States.
Andrew K GodwinCenter of BioModular Multi-Scale Systems for Precision Medicine, The University of Kansas, Lawrence, Kansas 66045, United States.
Malgorzata A WitekCenter of BioModular Multi-Scale Systems for Precision Medicine, The University of Kansas, Lawrence, Kansas 66045, United States.
Steven A SoperDepartment of Cancer Biology, The University of Kansas Medical Center, Cancer Center, Kansas City, Kansas 66160, United States.ORCID 0000-0002-8292-7058
University of Kansas · USUniversity of Kansas Medical Center · USBioFluidica (United States) · US

Funding

Transgenic & Gene-Targeting Shared ResourceP30CA168524 · NCI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI ROY A. JENSEN · 2012 to 2026
$40.1M
Understanding the mechanobiology of stem cells in a microengineered 3D cardiac tissue environment with cardiomyopathyP20GM103638 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI LUNTE, SUSAN M · 2012 to 2021
$22.1M
Using Integrated Omics to Identify Dysfunctional Genetic Mechanisms Influencing Schizophrenia and Sleep DisturbancesP20GM130423 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI Diane E Mahoney · 2019 to 2026
$21.5M
Single-Molecule Processing: Detection and Identification of Single DNAs, RNAs, and Proteins using Immobilized Nanoscale Enzymatic Reactors (INERs) and Nanoscale ElectrophoresisP41EB020594 · NIBIB · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Steven Allan Soper · 2015 to 2026
$15.2M
Synthetic Chemical Biology CoreP30GM145499 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI Susan M Lunte · 2022 to 2026
$6.9M
Parallel and high throughput isolation of cancer cell derived extracellular vesiclesR43CA232848 · NCI · BIOFLUIDICA, INC · PI MULLER, ROLF · 2018 to 2018
$239k
NCI NIH HHS P30 CA168524NCI NIH HHS R43 CA232848NIBIB NIH HHS P41 EB020594NIGMS NIH HHS P20 GM103638NIGMS NIH HHS P20 GM130423NIGMS NIH HHS P30 GM145499
6 · The paper itself

Abstract

Extracellular vesicles (EVs) carry RNA cargo that is believed to be associated with the cell-of-origin and thus have the potential to serve as a minimally invasive liquid biopsy marker for supplying molecular information to guide treatment decisions (i.e., precision medicine). We report the affinity isolation of EV subpopulations with monoclonal antibodies attached to the surface of a microfluidic chip that is made from a plastic to allow for high-scale production. The EV microfluidic affinity purification (EV-MAP) chip was used for the isolation of EVs sourced from two-orthogonal cell types and was demonstrated for its utility in a proof-of-concept application to provide molecular subtyping information for breast cancer patients. The orthogonal selection process better recapitulated the epithelial tumor microenvironment by isolating two subpopulations of EVs: EV

Indexed as

Breast NeoplasmsExtracellular VesiclesEpithelial Cell Adhesion MoleculeFemaleHumansLiquid BiopsyRNA, MessengerTumor MicroenvironmentEpithelial Cell Adhesion MoleculeRNA, Messenger

Identifiers

PMID37071799
PMCPMC10243595
OpenAlexW4366251213

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.