Evidence map›Paper›PMID 37070275›Full record

ArticleJournal of cell science2023

Purification of human β- and γ-actin from budding yeast.

Brian K Haarer, Morgan L Pimm, Ebbing P de Jong, David C Amberg, Jessica L Henty-Ridilla

Open access · hybridAbstract read
In one paragraph

Article in Journal of cell science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Brian K HaarerDepartment of Biochemistry and Molecular Biology, State University of New York (SUNY) Upstate Medical University, Syracuse, NY 13210, USA.ORCID 0000-0002-4018-222X
Morgan L PimmDepartment of Biochemistry and Molecular Biology, State University of New York (SUNY) Upstate Medical University, Syracuse, NY 13210, USA.ORCID 0000-0001-6370-1435
Ebbing P de JongMass Spectrometry Core Facility.ORCID 0000-0002-0362-1772
David C AmbergDepartment of Biochemistry and Molecular Biology, State University of New York (SUNY) Upstate Medical University, Syracuse, NY 13210, USA.ORCID 0000-0002-4709-8848
Jessica L Henty-RidillaDepartment of Biochemistry and Molecular Biology, State University of New York (SUNY) Upstate Medical University, Syracuse, NY 13210, USA.ORCID 0000-0002-7203-8791
SUNY Upstate Medical University · US

Funding

Mechanisms of coordinated actin and microtubule dynamicsR35GM133485 · NIGMS · UPSTATE MEDICAL UNIVERSITY · PI Jessica L. Ridilla · 2019 to 2026
$3.3M
Regulation of Actin DynamicsR01GM056189 · NIGMS · UPSTATE MEDICAL UNIVERSITY · PI AMBERG, DAVID C · 1998 to 2010
$2.3M
High performance Orbitrap Fusion Lumos mass spectrometer for proteomics and metabolomic researchS10OD023617 · OD · UPSTATE MEDICAL UNIVERSITY · PI KNUTSON, BRUCE ALAN · 2018 to 2018
$1.1M
NIGMS NIH HHS R35 GM133485NIH HHS GM133485NIH HHS R01 GM056189NIH HHS S10 OD023617
6 · The paper itself

Abstract

Biochemical studies of human actin and its binding partners rely heavily on abundant and easily purified α-actin from skeletal muscle. Therefore, muscle actin has been used to evaluate and determine the activities of most actin regulatory proteins but there is an underlying concern that these proteins perform differently from actin present in non-muscle cells. To provide easily accessible and relatively abundant sources of human β- or γ-actin (i.e. cytoplasmic actins), we developed Saccharomyces cerevisiae strains that express each as their sole source of actin. Both β- or γ-actin purified in this system polymerize and interact with various binding partners, including profilin, mDia1 (formin), fascin and thymosin-β4 (Tβ4). Notably, Tβ4 and profilin bind to β- or γ-actin with higher affinity than to α-actin, emphasizing the value of testing actin ligands with specific actin isoforms. These reagents will make specific isoforms of actin more accessible for future studies on actin regulation.

Indexed as

ActinsSaccharomycetalesForminsHumansProfilinsProtein IsoformsSaccharomyces cerevisiaeActinsForminsProfilinsProtein IsoformsCytoplasmic actinNon-muscle actinβ-actinγ-actin

Identifiers

PMID37070275
PMCPMC10184827
OpenAlexW4366239164

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.