Evidence map›Paper›PMID 37069524›Full record

ArticleBMC infectious diseases2023

Challenges with the use of Xpert HPV as a screening tool for oral HPV among people living with HIV (PLHIV): experiences from Pune, India.

Abigail Admase, Samir Joshi, Rohidas Borse, Prasad Deshpande, Vandana Kulkarni, Samir Khaire, Rahul Thakur, Amol Chavan, Smita Nimkar, Vidya Mave and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 83% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Abigail AdmaseZanvyl Kreiger School of Arts and Sciences, Johns Hopkins University, Baltimore, MD, USA.
Samir JoshiDepartment of Otorhinolaryngology and Head & Neck Surgery, Byramjee Jeejeebhoy Government Medical College, Pune, India.
Rohidas BorseDepartment of Medicine, Byramjee Jeejeebhoy Government Medical College, Pune, India.
Prasad DeshpandeByramjee Jeejeebhoy Government Medical College - Johns Hopkins University Clinical Research Site, Pune, India.
Vandana KulkarniByramjee Jeejeebhoy Government Medical College - Johns Hopkins University Clinical Research Site, Pune, India.
Samir KhaireDepartment of Dentistry, Byramjee Jeejeebhoy Government Medical College, Pune, India.
Rahul ThakurDepartment of Otorhinolaryngology and Head & Neck Surgery, Byramjee Jeejeebhoy Government Medical College, Pune, India.
Amol ChavanByramjee Jeejeebhoy Government Medical College - Johns Hopkins University Clinical Research Site, Pune, India.
Smita NimkarByramjee Jeejeebhoy Government Medical College - Johns Hopkins University Clinical Research Site, Pune, India.
Vidya MaveByramjee Jeejeebhoy Government Medical College - Johns Hopkins University Clinical Research Site, Pune, India.
Ivan MarbaniangByramjee Jeejeebhoy Government Medical College - Johns Hopkins University Clinical Research Site, Pune, India. ivan.marbaniang@mail.mcgill.ca.
Government Medical College · INJohns Hopkins University · US

Funding

The Asia-Pacific HIV Research CollaborationU01AI069907 · NIAID · FOUNDATION FOR AIDS RESEARCH · PI ANNETTE H SOHN · 2006 to 2026
$44.8M
NIAID NIH HHS U01 AI069907NIH HHS U01AI069907
6 · The paper itself

Abstract

backgroundPeople living with HIV (PLHIV) are at higher risk for human papillomavirus (HPV)-related oropharyngeal cancers compared to the general population. Xpert HPV test is a polymerase chain reaction (PCR) assay capable of rapid HPV detection. Performing the assay requires minimal intervention by laboratory personnel. Its use could improve oropharyngeal cancer screening among PLHIV living in low-and middle-income countries (LMICs) with limited diagnostic capacities. However, Xpert HPV performance for oral samples has not been evaluated. Here, we describe our experience with Xpert HPV and compare its results with traditional PCR, for oral samples.

methodsOral samples from 429 PLHIV receiving care at a tertiary care hospital affiliated antiretroviral therapy center in Pune, India were used. Samples were collected either after a 30s oral rinse and gargle (n = 335) or in combination with cytobrush scraping of the oral mucosa (n = 91). Unsuccessful tests were those that generated an invalid or error result on Xpert HPV. Successful tests were those that generated a positive or negative result. Kappa statistic was used to compare concordance between Xpert HPV and traditional real-time PCR results.

resultsThere were 29.8% (n = 127) unsuccessful tests, of which 78.7% (n = 100) were invalid and 21.3% (n = 27) were error results. Adding cytobrush scraping to oral rinse as a collection procedure did not significantly reduce the proportion of unsuccessful tests (p = 0.9). For successful tests, HPV positivity on Xpert was 0.3% (n = 1/299). Kappa statistic was 0.11, indicating poor agreement between Xpert HPV and traditional PCR results.

conclusionsPresently, Xpert HPV appears to have limited use for oral HPV detection among PLHIV using oral samples. More research to improve the diagnostic capabilities of Xpert HPV for oral samples among PLHIV is needed.

Indexed as

HIV InfectionsPapillomavirus InfectionsHuman Papillomavirus VirusesHumansIndiaPapillomaviridaeReal-Time Polymerase Chain ReactionHIVHPVIndiaXpert HPV

Identifiers

PMID37069524
PMCPMC10108491
OpenAlexW4366089369

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.