Evidence map›Paper›PMID 37067905›Full record

ArticleBlood cancer discovery2023

METTL3-Mediated m6A Modification Controls Splicing Factor Abundance and Contributes to Aggressive CLL.

Yiming Wu, Meiling Jin, Mike Fernandez, Kevyn L Hart, Aijun Liao, Xinzhou Ge, Stacey M Fernandes, Tinisha McDonald, Zhenhua Chen, Daniel Röth and 11 more

Open access · greenAbstract read
In one paragraph

Article in Blood cancer discovery, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 27 citations in OpenAlex.

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  16. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

21 authors at 4 institutions in 1 country.

Yiming Wu *Department of Systems Biology, Beckman Research Institute, City of Hope National Comprehensive Cancer Center, Monrovia, California.ORCID 0000-0001-5083-8950
Meiling Jin *Department of Systems Biology, Beckman Research Institute, City of Hope National Comprehensive Cancer Center, Monrovia, California.ORCID 0000-0001-8539-9177
Mike FernandezDepartment of Systems Biology, Beckman Research Institute, City of Hope National Comprehensive Cancer Center, Monrovia, California.ORCID 0000-0002-4948-8743
Kevyn L HartDepartment of Systems Biology, Beckman Research Institute, City of Hope National Comprehensive Cancer Center, Monrovia, California.ORCID 0000-0002-7567-1744
Aijun LiaoDepartment of Systems Biology, Beckman Research Institute, City of Hope National Comprehensive Cancer Center, Monrovia, California.ORCID 0009-0003-5057-2541
Xinzhou GeDepartment of Statistics, University of California, Los Angeles, California.ORCID 0000-0002-8229-5716
Stacey M FernandesDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0002-5061-5199
Tinisha McDonaldThe Hematopoietic Tissue Biorepository, City of Hope National Comprehensive Cancer Center, Duarte, California.ORCID 0009-0004-8705-4892
Zhenhua ChenDepartment of Systems Biology, Beckman Research Institute, City of Hope National Comprehensive Cancer Center, Monrovia, California.ORCID 0000-0002-1381-0235
Daniel RöthDepartment of Molecular Imaging and Therapy, Diabetes and Metabolism Research Institute, Beckman Research Institute, City of Hope, Duarte, California.ORCID 0000-0002-1190-3219
Lucy Y GhodaThe Hematopoietic Tissue Biorepository, City of Hope National Comprehensive Cancer Center, Duarte, California.ORCID 0000-0002-8212-3586
Guido MarcucciThe Hematopoietic Tissue Biorepository, City of Hope National Comprehensive Cancer Center, Duarte, California.ORCID 0000-0002-3983-5908
Markus KalkumDepartment of Molecular Imaging and Therapy, Diabetes and Metabolism Research Institute, Beckman Research Institute, City of Hope, Duarte, California.ORCID 0000-0002-9506-671X
Raju K PillaiDepartment of Pathology, City of Hope National Comprehensive Cancer Center, Duarte, California.ORCID 0000-0001-8553-4252
Alexey V DanilovDepartment of Hematology & Hemato-poietic Cell Transplantation, City of Hope Comprehensive Cancer Center, Duarte, California.ORCID 0000-0003-4461-0970
Jingyi Jessica LiDepartment of Statistics, University of California, Los Angeles, California.ORCID 0000-0002-9288-5648
Jianjun ChenDepartment of Systems Biology, Beckman Research Institute, City of Hope National Comprehensive Cancer Center, Monrovia, California.ORCID 0000-0003-3749-2902
Jennifer R BrownDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0003-2040-4961
Steven T RosenDepartment of Hematology & Hemato-poietic Cell Transplantation, City of Hope Comprehensive Cancer Center, Duarte, California.ORCID 0000-0002-8818-7724
Tanya SiddiqiDepartment of Hematology & Hemato-poietic Cell Transplantation, City of Hope Comprehensive Cancer Center, Duarte, California.ORCID 0000-0001-5292-8298
Lili WangDepartment of Systems Biology, Beckman Research Institute, City of Hope National Comprehensive Cancer Center, Monrovia, California.ORCID 0000-0001-5028-2868
City of Hope · USCity Of Hope National Medical Center · USDana-Farber Cancer Institute · USUniversity of California, Los Angeles · US

Funding

Transgenic Mouse FacilityP30CA033572 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI XIWEI WU · 1985 to 2026
$86.3M
(PQ8) Genetically faithful murine models for studying disease progression in chronic lymphocytic leukemiaR01CA216273 · NCI · DANA-FARBER CANCER INST · PI WANG, LILI, WU, CATHERINE JU-YING · 2017 to 2021
$3.5M
Cooperation of SF3B1 mutations and ATM deletions in the pathogenesis of chronic lymphocytic leukemiaR01CA240910 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI WANG, LILI · 2020 to 2024
$2.1M
NCI NIH HHS P30 CA033572NCI NIH HHS R01 CA240910
6 · The paper itself

Abstract

RNA splicing dysregulation underlies the onset and progression of cancers. In chronic lymphocytic leukemia (CLL), spliceosome mutations leading to aberrant splicing occur in ∼20% of patients. However, the mechanism for splicing defects in spliceosome-unmutated CLL cases remains elusive. Through an integrative transcriptomic and proteomic analysis, we discover that proteins involved in RNA splicing are posttranscriptionally upregulated in CLL cells, resulting in splicing dysregulation. The abundance of splicing complexes is an independent risk factor for poor prognosis. Moreover, increased splicing factor expression is highly correlated with the abundance of METTL3, an RNA methyltransferase that deposits N6-methyladenosine (m6A) on mRNA. METTL3 is essential for cell growth in vitro and in vivo and controls splicing factor protein expression in a methyltransferase-dependent manner through m6A modification-mediated ribosome recycling and decoding. Our results uncover METTL3-mediated m6A modification as a novel regulatory axis in driving splicing dysregulation and contributing to aggressive CLL. SIGNIFICANCE: METTL3 controls widespread splicing factor abundance via translational control of m6A-modified mRNA, contributes to RNA splicing dysregulation and disease progression in CLL, and serves as a potential therapeutic target in aggressive CLL. See related commentary by Janin and Esteller, p. 176. This article is highlighted in the In This Issue feature, p. 171.

Indexed as

Alternative SplicingLeukemia, Lymphocytic, Chronic, B-CellHumansMethyltransferasesProteomicsRNA, MessengerRNA Splicing FactorsMethyltransferasesMETTL3 protein, humanRNA, MessengerRNA Splicing Factors

Identifiers

PMID37067905
PMCPMC10150290
OpenAlexW4366082998

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.