Evidence map›Paper›PMID 37067863›Full record

ArticleGenetics2023

A Twist-Box domain of the C. elegans Twist homolog, HLH-8, plays a complex role in transcriptional regulation.

Michael J Gruss, Colleen O'Callaghan, Molly Donnellan, Ann K Corsi

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. SEM-2/SoxC regulates multiple aspects ofbioRxiv : the preprint server for biology · 2024
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Michael J GrussDepartment of Biology, The Catholic University of America, 620 Michigan Ave., NE, Washington, D.C. 20064USA.
Colleen O'CallaghanDepartment of Biology, The Catholic University of America, 620 Michigan Ave., NE, Washington, D.C. 20064USA.
Molly DonnellanDepartment of Biology, The Catholic University of America, 620 Michigan Ave., NE, Washington, D.C. 20064USA.
Ann K CorsiDepartment of Biology, The Catholic University of America, 620 Michigan Ave., NE, Washington, D.C. 20064USA.ORCID 0000-0002-6661-5214
University of America · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Transcriptional regulation of mesoderm developmentR15DE018519 · NIDCR · CATHOLIC UNIVERSITY OF AMERICA · PI CORSI, ANN K · 2007 to 2017
$644k
NIDCR NIH HHS R15 DE018519NIH HHS P40 OD010440
6 · The paper itself

Abstract

TWIST1 is a basic helix-loop-helix (bHLH) transcription factor in humans that functions in mesoderm differentiation. TWIST1 primarily regulates genes as a transcriptional repressor often through TWIST-Box domain-mediated protein-protein interactions. The TWIST-Box also can function as an activation domain requiring 3 conserved, equidistant amino acids (LXXXFXXXR). Autosomal dominant mutations in TWIST1, including 2 reported in these conserved amino acids (F187L and R191M), lead to craniofacial defects in Saethre-Chotzen syndrome (SCS). Caenorhabditis elegans has a single TWIST1 homolog, HLH-8, that functions in the differentiation of the muscles responsible for egg laying and defecation. Null alleles in hlh-8 lead to severely egg-laying defective and constipated animals due to defects in the corresponding muscles. TWIST1 and HLH-8 share sequence identity in their bHLH regions; however, the domain responsible for the transcriptional activity of HLH-8 is unknown. Sequence alignment suggests that HLH-8 has a TWIST-Box LXXXFXXXR motif; however, its function also is unknown. CRISPR/Cas9 genome editing was utilized to generate a domain deletion and several missense mutations, including those analogous to SCS patients, in the 3 conserved HLH-8 amino acids to investigate their functional role. The TWIST-Box alleles did not phenocopy hlh-8 null mutants. The strongest phenotype detected was a retentive (Ret) phenotype with late-stage embryos in the hermaphrodite uterus. Further, GFP reporters of HLH-8 downstream target genes (arg-1::gfp and egl-15::gfp) revealed tissue-specific, target-specific, and allele-specific defects. Overall, the TWIST-Box in HLH-8 is partially required for the protein's transcriptional activity, and the conserved amino acids contribute unequally to the domain's function.

Indexed as

AcrocephalosyndactyliaCaenorhabditis elegansAnimalsBasic Helix-Loop-Helix ProteinsCaenorhabditis elegans ProteinsFemaleHumansMutationTranscription FactorsTwist-Related Protein 1Basic Helix-Loop-Helix ProteinsCaenorhabditis elegans ProteinsHLH-8 protein, C elegansTranscription FactorsTwist-Related Protein 1C. elegansHLH-8Saethre–Chotzen syndrometissue-specific transcriptional regulationTWIST1Twist-Box domain

Identifiers

PMID37067863
PMCPMC10411555
OpenAlexW4366082833

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.