Evidence map›Paper›PMID 37067647›Full record

ArticleWorld journal of microbiology & biotechnology2023

Quorum sensing activities and genomic insights of plant growth-promoting rhizobacteria isolated from Assam tea.

Ankita Chopra, Dattatray Mongad, Surekha Satpute, Pranab Behari Mazumder, Praveen Rahi

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Article in World journal of microbiology & biotechnology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Ankita ChopraDepartment of Biotechnology, Assam University, Silchar, India.
Dattatray MongadNational Centre for Microbial Resource, National Centre for Cell Science, Pune, India.
Surekha SatputeDepartment of Microbiology, Savitribai Phule Pune University, Pune, India.
Pranab Behari MazumderDepartment of Biotechnology, Assam University, Silchar, India.
Praveen RahiNational Centre for Microbial Resource, National Centre for Cell Science, Pune, India. prahi@pasteur.fr.
Assam University · INNational Centre for Cell Science · INSavitribai Phule Pune University · INUniversité Paris Cité · FR

Funding

Department of Biotechnology project BT/Coord. II/01/03/2016Major Research Project, department of biotechnology, India BT/222/NE/TBP/11Rashtriya Uchchatar Shiksha Abhiyan (RUSA-CBS-TH- 3.2)
6 · The paper itself

Abstract

Secretion of quorum sensing (QS) molecules is important for the effective colonization of host plants by plant growth-promoting rhizobacteria. The current study aims at the isolation and characterization of tea rhizo bacteria, which produce the QS molecules, acyl homoserine lactone (AHLs), along with multiple plant growth-promoting (PGP) activities. Thirty-one isolates were isolated from the tea rhizosphere, and screening for PGP activities resulted in the selection of isolates RTE1 and RTE4 with multiple PGP traits, inhibiting the growth of tea fungal pathogens. Both isolates also showed production of AHL molecules when screened using two biosensor strains, Chromobacterium violaceum CV026 and Escherichia coli MT 102(jb132). The isolates identified as Burkholderia cepacia RTE1 and Pseudomonas aeruginosa RTE4 based on genome-based analysis like phylogeny, dDDH, and fastANI calculation. Detailed characterization of AHLs produced by the isolates using reverse-phase TLC, fluorometry, and LC-MS indicated that the isolate RTE1 produced a short chain, C8, and a long chain C12 AHL, while RTE4 produced short-chain AHLs C4 and C6. Confocal microscopy revealed the formation of thick biofilm by RTE1 and RTE4 (18 and 23 μm, respectively). Additionally, we found several genes involved in QS, and PGP, inducing systemic resistance (ISR) activities such as lasI/R, qscR, pqq, pvd, aldH, acdS, phz, Sod, rml, and Pch, and biosynthetic gene clusters like N-acyl homoserine lactone synthase, terpenes, pyochelin, and pyocyanin. Based on the functional traits like PGP, biofilm formation and production of AHL molecules, and genetic potential of the isolates B. cepacia RTE1 and P. aeruginosa RTE4 appear promising candidates to improve the health and growth of tea plantations.

Indexed as

Acyl-ButyrolactonesQuorum SensingBiofilmsGenomicsPseudomonas aeruginosaTeaAcyl-ButyrolactonesTeaAcyl-homoserine lactoneBurkholderia cepaciaGenomicsPGPRPseudomonas aeruginosa

Identifiers

PMID37067647
OpenAlexW4366082842

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.