Evidence map›Paper›PMID 37066763›Full record

ArticleEMBO reports2023

A glycine zipper motif is required for the translocation of a T6SS toxic effector into target cells.

Jemal Ali, Manda Yu, Li-Kang Sung, Yee-Wai Cheung, Erh-Min Lai

Open access · hybridAbstract read
In one paragraph

Article in EMBO reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Differential expression of theApplied and environmental microbiology · 2024
    Article
  6. Article
  7. Protein-Protein Interactions: Co-immunoprecipitation.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jemal AliInstitute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan.
Manda YuInstitute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan.ORCID 0000-0001-5932-9597
Li-Kang SungInstitute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan.
Yee-Wai CheungInstitute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan.ORCID 0000-0002-1421-4419
Erh-Min LaiInstitute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan.ORCID 0000-0003-3630-8683
Institute of Plant and Microbial Biology, Academia Sinica · TWNational Chung Hsing University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Type VI secretion systems (T6SSs) can deliver diverse toxic effectors into eukaryotic and bacterial cells. Although much is known about the regulation and assembly of T6SS, the translocation mechanism of effectors into the periplasm and/or cytoplasm of target cells remains elusive. Here, we use the Agrobacterium tumefaciens DNase effector Tde1 to unravel the mechanism of translocation from attacker to prey. We demonstrate that Tde1 binds to its adaptor Tap1 through the N-terminus, which harbors continuous copies of GxxxG motifs resembling the glycine zipper structure found in proteins involved in the membrane channel formation. Amino acid substitutions on G

Indexed as

Bacterial ProteinsType VI Secretion SystemsAgrobacterium tumefaciensBacteriaCell MembraneBacterial ProteinsType VI Secretion SystemsAgrobacterium tumefaciensDNase effectorglycine zippertranslocationType VI secretion system

Identifiers

PMID37066763
PMCPMC10240207
OpenAlexW4366083722

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.