Evidence map›Paper›PMID 37065756›Full record

ArticleFrontiers in endocrinology2023

ZBTB7A as a novel vulnerability in neuroendocrine prostate cancer.

Song Yi Bae, Hannah E Bergom, Abderrahman Day, Joseph T Greene, Zoi E Sychev, Gabrianne Larson, Eva Corey, Stephen R Plymate, Tanya S Freedman, Justin H Hwang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in endocrinology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Song Yi BaeDepartment of Pharmacology, University of Minnesota-Twin Cities, Minneapolis, MN, United States.
Hannah E BergomDepartment of Medicine, University of Minnesota-Twin Cities, Minneapolis, MN, United States.
Abderrahman DayDepartment of Medicine, University of Minnesota-Twin Cities, Minneapolis, MN, United States.
Joseph T GreeneDepartment of Pharmacology, University of Minnesota-Twin Cities, Minneapolis, MN, United States.
Zoi E SychevDepartment of Pharmacology, University of Minnesota-Twin Cities, Minneapolis, MN, United States.
Gabrianne LarsonDepartment of Pharmacology, University of Minnesota-Twin Cities, Minneapolis, MN, United States.
Eva CoreyDepartment of Urology, University of Washington, Seattle, WA, United States.
Stephen R PlymateDepartment of Medicine, Division of Gerontology and Geriatric Medicine, University of Washington, Seattle, WA, United States.
Tanya S FreedmanDepartment of Pharmacology, University of Minnesota-Twin Cities, Minneapolis, MN, United States.
Justin H HwangDepartment of Medicine, University of Minnesota-Twin Cities, Minneapolis, MN, United States.
Justin M DrakeDepartment of Pharmacology, University of Minnesota-Twin Cities, Minneapolis, MN, United States.
University of Minnesota · USUniversity of Washington · US

Funding

TRANSCRIPTOME AND PROTEOME STRATIFICATION OF PROSTATE ADENOCARCINOMA PHENOTYPESP50CA097186 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI PETER S NELSON · 2002 to 2026
$58.1M
Steroid Metabolism in Castration-Resistant Prostate CancerP01CA163227 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI PETER S NELSON · 2013 to 2026
$25.0M
TRAINING GRANT IN MICROBIOLOGY/CANCER RESEARCHT32CA009138 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Scott M. Dehm · 1985 to 2026
$11.3M
Roles of the Src-Family Kinases LynA and LynB in Macrophage Inflammatory SignalingR01AR073966 · NIAMS · UNIVERSITY OF MINNESOTA · PI FREEDMAN, TANYA S. · 2018 to 2022
$2.2M
RET Regulation and Targeting in Neuroendocrine Prostate CancerR01CA269801 · NCI · UNIVERSITY OF MINNESOTA · PI Justin Michael Drake · 2022 to 2026
$2.2M
NCI NIH HHS P01 CA163227NCI NIH HHS P50 CA097186NCI NIH HHS R01 CA269801NCI NIH HHS T32 CA009138NIAMS NIH HHS R01 AR073966
6 · The paper itself

Abstract

Neuroendocrine prostate cancer (NEPC) is a highly aggressive subtype of prostate cancer. NEPC is characterized by the loss of androgen receptor (AR) signaling and transdifferentiation toward small-cell neuroendocrine (SCN) phenotypes, which results in resistance to AR-targeted therapy. NEPC resembles other SCN carcinomas clinically, histologically and in gene expression. Here, we leveraged SCN phenotype scores of various cancer cell lines and gene depletion screens from the Cancer Dependency Map (DepMap) to identify vulnerabilities in NEPC. We discovered ZBTB7A, a transcription factor, as a candidate promoting the progression of NEPC. Cancer cells with high SCN phenotype scores showed a strong dependency on RET kinase activity with a high correlation between RET and ZBTB7A dependencies in these cells. Utilizing informatic modeling of whole transcriptome sequencing data from patient samples, we identified distinct gene networking patterns of ZBTB7A in NEPC versus prostate adenocarcinoma. Specifically, we observed a robust association of ZBTB7A with genes promoting cell cycle progression, including apoptosis regulating genes. Silencing ZBTB7A in a NEPC cell line confirmed the dependency on ZBTB7A for cell growth

Indexed as

Neuroendocrine TumorsProstatic NeoplasmsCell Line, TumorDNA-Binding ProteinsHumansMaleTranscription FactorsDNA-Binding ProteinsTranscription FactorsZBTB7A protein, humancancer dependency map (DepMap)castration-resistant prostate cancer (CRPC)cell cyclegene networkneuroendocrine prostate cancer (NEPC)RET receptor tyrosine kinasesmall-cell neuroendocrine (SCN)ZBTB7A

Identifiers

PMID37065756
PMCPMC10090553
OpenAlexW4361299641

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.