Evidence map›Paper›PMID 37062002›Full record

ArticleCancer discovery2023

Integrative Analysis of a Large Real-World Cohort of Small Cell Lung Cancer Identifies Distinct Genetic Subtypes and Insights into Histologic Transformation.

Smruthy Sivakumar, Jay A Moore, Meagan Montesion, Radwa Sharaf, Douglas I Lin, Caterina I Colón, Zoe Fleishmann, Ericka M Ebot, Justin Y Newberg, Jennifer M Mills and 6 more

Open access · hybridAbstract read
In one paragraph

Article in Cancer discovery, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 103 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
103citing papers in PubMed, 2 pooled it
31.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

103 citing papers in PubMed, 2 syntheses or guidelines pooled it, 128 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Evaluating the prognostic impact of multipleEuropean journal of nuclear medicine and molecular imaging · 2026
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  12. Clinically actionable molecular alterations in Rb-retained small cell lung carcinoma variants.Virchows Archiv : an international journal of pathology · 2026
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43 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

Smruthy SivakumarFoundation Medicine, Inc., Cambridge, Massachusetts.ORCID 0000-0001-7790-5615
Jay A MooreFoundation Medicine, Inc., Cambridge, Massachusetts.ORCID 0000-0003-1826-3274
Meagan MontesionFoundation Medicine, Inc., Cambridge, Massachusetts.ORCID 0000-0001-9155-556X
Radwa SharafFoundation Medicine, Inc., Cambridge, Massachusetts.ORCID 0000-0002-5214-380X
Douglas I LinFoundation Medicine, Inc., Cambridge, Massachusetts.ORCID 0000-0003-0105-9760
Caterina I ColónDepartments of Pediatrics and Genetics, Stanford University, Stanford, California.ORCID 0000-0001-6073-8793
Zoe FleishmannFoundation Medicine, Inc., Cambridge, Massachusetts.ORCID 0000-0003-1616-802X
Ericka M EbotFoundation Medicine, Inc., Cambridge, Massachusetts.ORCID 0000-0001-7144-693X
Justin Y NewbergFoundation Medicine, Inc., Cambridge, Massachusetts.ORCID 0000-0002-3764-4956
Jennifer M MillsFoundation Medicine, Inc., Cambridge, Massachusetts.ORCID 0009-0009-3177-8302
Priti S HegdeFoundation Medicine, Inc., Cambridge, Massachusetts.ORCID 0000-0002-0814-0644
Quintin PanUniversity Hospitals Seidman Cancer Center and Case Western Reserve University, Cleveland, Ohio.ORCID 0000-0001-6952-3529
Afshin DowlatiUniversity Hospitals Seidman Cancer Center and Case Western Reserve University, Cleveland, Ohio.ORCID 0000-0003-4535-6839
Garrett M FramptonFoundation Medicine, Inc., Cambridge, Massachusetts.ORCID 0000-0002-2361-2750
Julien SageDepartments of Pediatrics and Genetics, Stanford University, Stanford, California.ORCID 0000-0002-8928-9968
Christine M LovlyDivision of Hematology-Oncology, Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee.ORCID 0000-0002-3641-6361
GlobalFoundries (United States) · USStanford University · USUniversity Hospitals Seidman Cancer Center · USVanderbilt University Medical Center · US

Funding

The Role of Focal Oncogene Amplifications in Lung CancerP01CA129243 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI Marc Ladanyi · 2007 to 2026
$31.2M
Single-Cell Biology and Data Analysis Shared Resource (SCB-DA SR)U54CA217450 · NCI · VANDERBILT UNIVERSITY · PI QUARANTA, VITO · 2018 to 2022
$8.5M
Investigating molecular and cellular mechanisms of SCLC development to identify novel therapeutic strategiesR35CA231997 · NCI · STANFORD UNIVERSITY · PI SAGE, JULIEN · 2019 to 2025
$6.2M
ECOG-ACRIN Thoracic Malignancies Integrated Translational Science CenterUG1CA233259 · NCI · EMORY UNIVERSITY · PI CARBONE, DAVID P., LEAL, TICIANA · 2019 to 2025
$5.1M
Molecular mechanisms of SCLC initiation and detection in mice and humansU01CA231851 · NCI · STANFORD UNIVERSITY · PI KRASNOW, MARK A · 2018 to 2022
$2.9M
Phenotype Interactions in SCLC Development and DetectionU01CA224276 · NCI · VANDERBILT UNIVERSITY · PI WEAVER, ALISSA M · 2018 to 2022
$1.6M
NCI NIH HHS P01 CA129243NCI NIH HHS R35 CA231997NCI NIH HHS U01 CA224276NCI NIH HHS U01 CA231851NCI NIH HHS U54 CA217450NCI NIH HHS UG1 CA233259
6 · The paper itself

Abstract

Small cell lung cancer (SCLC) is a recalcitrant neuroendocrine carcinoma with dismal survival outcomes. A major barrier in the field has been the relative paucity of human tumors studied. Here we provide an integrated analysis of 3,600 "real-world" SCLC cases. This large cohort allowed us to identify new recurrent alterations and genetic subtypes, including STK11-mutant tumors (1.7%) and TP53/RB1 wild-type tumors (5.5%), as well as rare cases that were human papillomavirus-positive. In our cohort, gene amplifications on 4q12 are associated with increased overall survival, whereas CCNE1 amplification is associated with decreased overall survival. We also identify more frequent alterations in the PTEN pathway in brain metastases. Finally, profiling cases of SCLC containing oncogenic drivers typically associated with NSCLC demonstrates that SCLC transformation may occur across multiple distinct molecular cohorts of NSCLC. These novel and unsuspected genetic features of SCLC may help personalize treatment approaches for this fatal form of cancer. SIGNIFICANCE: Minimal changes in therapy and survival outcomes have occurred in SCLC for the past four decades. The identification of new genetic subtypes and novel recurrent mutations as well as an improved understanding of the mechanisms of transformation to SCLC from NSCLC may guide the development of personalized therapies for subsets of patients with SCLC. This article is highlighted in the In This Issue feature, p. 1501.

Indexed as

Carcinoma, NeuroendocrineCarcinoma, Non-Small-Cell LungLung NeoplasmsSmall Cell Lung CarcinomaHumansMutation

Identifiers

PMID37062002
PMCPMC10326603
OpenAlexW4365997929

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.