Evidence map›Paper›PMID 37061538›Full record

ArticleNature communications2023

Native doublet microtubules from Tetrahymena thermophila reveal the importance of outer junction proteins.

Shintaroh Kubo, Corbin S Black, Ewa Joachimiak, Shun Kai Yang, Thibault Legal, Katya Peri, Ahmad Abdelzaher Zaki Khalifa, Avrin Ghanaeian, Caitlyn L McCafferty, Melissa Valente-Paterno and 6 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
17.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 118 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Microtubule inner proteins in apicomplexan parasites.Biochemical Society transactions · 2026
    Review
  5. Article
  6. Article
  7. Review
  8. Cryo-EM single-particle analysis expanding towards increasingly native samples.Acta crystallographica. Section D, Structural biology · 2025
    Review
  9. Review
  10. Article
  11. Article
  12. Heterogeneity of radial spoke components in Tetrahymena cilia.Cellular and molecular life sciences : CMLS · 2025
    Article
  13. Complex Sex Determination in the Grey MulletAnimals : an open access journal from MDPI · 2025
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Alpha-tubulin tails regulate axoneme differentiation.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 3 countries.

Shintaroh Kubo *Department of Anatomy and Cell Biology, McGill University, Montreal, QC, Canada.
Corbin S Black *Department of Anatomy and Cell Biology, McGill University, Montreal, QC, Canada.ORCID 0000-0003-2777-6434
Ewa Joachimiak *Laboratory of Cytoskeleton and Cilia Biology, Nencki Institute of Experimental Biology of Polish Academy of Sciences, 3 Pasteur Street, 02-093, Warsaw, Poland.
Shun Kai YangDepartment of Anatomy and Cell Biology, McGill University, Montreal, QC, Canada.
Thibault LegalDepartment of Anatomy and Cell Biology, McGill University, Montreal, QC, Canada.
Katya PeriDepartment of Anatomy and Cell Biology, McGill University, Montreal, QC, Canada.
Ahmad Abdelzaher Zaki KhalifaDepartment of Anatomy and Cell Biology, McGill University, Montreal, QC, Canada.
Avrin GhanaeianDepartment of Anatomy and Cell Biology, McGill University, Montreal, QC, Canada.
Caitlyn L McCaffertyDepartment of Molecular Biosciences, Center for Systems and Synthetic Biology, University of Texas, Austin, TX, 78712, USA.
Melissa Valente-PaternoDepartment of Anatomy and Cell Biology, McGill University, Montreal, QC, Canada.
Chelsea De BellisDepartment of Anatomy and Cell Biology, McGill University, Montreal, QC, Canada.
Phuong M HuynhDepartment of Anatomy and Cell Biology, McGill University, Montreal, QC, Canada.
Zhe FanDepartment of Anatomy and Cell Biology, McGill University, Montreal, QC, Canada.
Edward M MarcotteDepartment of Molecular Biosciences, Center for Systems and Synthetic Biology, University of Texas, Austin, TX, 78712, USA.ORCID 0000-0001-8808-180X
Dorota WlogaLaboratory of Cytoskeleton and Cilia Biology, Nencki Institute of Experimental Biology of Polish Academy of Sciences, 3 Pasteur Street, 02-093, Warsaw, Poland. d.wloga@nencki.edu.pl.
Khanh Huy BuiDepartment of Anatomy and Cell Biology, McGill University, Montreal, QC, Canada. huy.bui@mcgill.ca.ORCID 0000-0003-2814-9889
McGill University · CAInstytut Biologii Doświadczalnej im. Marcelego Nenckiego · PLThe University of Texas at Austin · USMcGill University Health Centre · CA

Funding

Mapping the CPLANE interactome, an extensive protein interaction network underlying human ciliopathiesR01HD085901 · NICHD · UNIVERSITY OF TEXAS AT AUSTIN · PI EDWARD M MARCOTTE, John B Wallingford · 2016 to 2026
$6.2M
NICHD NIH HHS R01 HD085901
6 · The paper itself

Abstract

Cilia are ubiquitous eukaryotic organelles responsible for cellular motility and sensory functions. The ciliary axoneme is a microtubule-based cytoskeleton consisting of two central singlets and nine outer doublet microtubules. Cryo-electron microscopy-based studies have revealed a complex network inside the lumen of both tubules composed of microtubule-inner proteins (MIPs). However, the functions of most MIPs remain unknown. Here, we present single-particle cryo-EM-based analyses of the Tetrahymena thermophila native doublet microtubule and identify 42 MIPs. These data shed light on the evolutionarily conserved and diversified roles of MIPs. In addition, we identified MIPs potentially responsible for the assembly and stability of the doublet outer junction. Knockout of the evolutionarily conserved outer junction component CFAP77 moderately diminishes Tetrahymena swimming speed and beat frequency, indicating the important role of CFAP77 and outer junction stability in cilia beating generation and/or regulation.

Indexed as

TetrahymenaTetrahymena thermophilaAxonemeCiliaCryoelectron MicroscopyCytoskeletonMicrotubule ProteinsMicrotubulesMicrotubule Proteins

Identifiers

PMID37061538
PMCPMC10105768
OpenAlexW4365816407

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.