Evidence map›Paper›PMID 37059892›Full record

ArticleJournal of digital imaging2023

DeepBLS: Deep Feature-Based Broad Learning System for Tissue Phenotyping in Colorectal Cancer WSIs.

Ahsan Baidar Bakht, Sajid Javed, Syed Qasim Gilani, Hamad Karki, Muhammad Muneeb, Naoufel Werghi

Open access · greenAbstract read
In one paragraph

Article in Journal of digital imaging, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Article
  3. AttnW2V-Enhancer: Leveraging attention and Word2Vec for enhanced enhancer prediction.Computational and structural biotechnology journal · 2025
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Ahsan Baidar BakhtElectrical and Computer Engineering Department, Khalifa University, 12778, Abu Dhabi, United Arab Emirates. ahsan.bakht@ku.ac.ae.ORCID 0000-0002-9079-0960
Sajid JavedElectrical and Computer Engineering Department, Khalifa University, 12778, Abu Dhabi, United Arab Emirates.
Syed Qasim GilaniDepartment of Electrical Engineering and Computer Science, Florida Atlantic University, Boca Raton, 33431, USA.
Hamad KarkiMechanical Engineering Department, Khalifa University, 12778, Abu Dhabi, United Arab Emirates.
Muhammad MuneebElectrical and Computer Engineering Department, Khalifa University, 12778, Abu Dhabi, United Arab Emirates.
Naoufel WerghiElectrical and Computer Engineering Department, Khalifa University, 12778, Abu Dhabi, United Arab Emirates.
Khalifa University of Science and Technology · AEFlorida Atlantic University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tissue phenotyping is a fundamental step in computational pathology for the analysis of tumor micro-environment in whole slide images (WSIs). Automatic tissue phenotyping in whole slide images (WSIs) of colorectal cancer (CRC) assists pathologists in better cancer grading and prognostication. In this paper, we propose a novel algorithm for the identification of distinct tissue components in colon cancer histology images by blending a comprehensive learning system with deep features extraction in the current work. Firstly, we extracted the features from the pre-trained VGG19 network which are then transformed into mapped features space for nodes enhancement generation. Utilizing both mapped features and enhancement nodes, the proposed algorithm classifies seven distinct tissue components including stroma, tumor, complex stroma, necrotic, normal benign, lymphocytes, and smooth muscle. To validate our proposed model, the experiments are performed on two publicly available colorectal cancer histology datasets. We showcase that our approach achieves a remarkable performance boost surpassing existing state-of-the-art methods by (1.3% AvTP, 2% F1) and (7% AvTP, 6% F1) on CRCD-1, and CRCD-2, respectively.

Indexed as

AlgorithmsColorectal NeoplasmsHumansLearningPathologistsTumor MicroenvironmentBroad learning systemColorectal cancerComputational pathologyConvNet feature extractor

Identifiers

PMID37059892
PMCPMC10406762
OpenAlexW4365504611

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.