Evidence map›Paper›PMID 37058433›Full record

ArticleEnvironmental health perspectives2023

High-Dimensional Mediation Analysis: A New Method Applied to Maternal Smoking, Placental DNA Methylation, and Birth Outcomes.

Basile Jumentier, Claire-Cécile Barrot, Maxime Estavoyer, Jorg Tost, Barbara Heude, Olivier François, Johanna Lepeule

Abstract read
In one paragraph

Article in Environmental health perspectives, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Basile JumentierUniversité Grenoble-Alpes, Centre National de la Recherche Scientifique, Grenoble INP, TIMC CNRS UMR 5525, Grenoble, France.
Claire-Cécile BarrotUniversité Grenoble-Alpes, Centre National de la Recherche Scientifique, Grenoble INP, TIMC CNRS UMR 5525, Grenoble, France.
Maxime EstavoyerUniversité Grenoble-Alpes, Centre National de la Recherche Scientifique, Grenoble INP, TIMC CNRS UMR 5525, Grenoble, France.
Jorg TostLaboratory for Epigenetics and Environment, Centre National de Recherche en Genomique Humaine, CEA - Institut de Biologie François Jacob, University Paris Saclay, Evry, France.
Barbara HeudeUniversité Paris Cité et Université Sorbonne Paris Nord, Inserm, INRAE, Centre de Recherche en Épidémiologie et StatistiqueS (CRESS), F-75004 Paris, France.
Olivier FrançoisUniversité Grenoble-Alpes, Centre National de la Recherche Scientifique, Grenoble INP, TIMC CNRS UMR 5525, Grenoble, France.
Johanna LepeuleUniversité Grenoble-Alpes, Inserm, CNRS, Team of Environmental Epidemiology Applied to Development and Respiratory Health, Institute for Advanced Biosciences, Grenoble, France.ORCID 0000-0001-8907-197X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHigh-dimensional mediation analysis is an extension of unidimensional mediation analysis that includes multiple mediators, and increasingly it is being used to evaluate the indirect omics-layer effects of environmental exposures on health outcomes. Analyses involving high-dimensional mediators raise several statistical issues. Although many methods have recently been developed, no consensus has been reached about the optimal combination of approaches to high-dimensional mediation analyses.

objectivesWe developed and validated a method for high-dimensional mediation analysis (HDMAX2) and applied it to evaluate the causal role of placental DNA methylation in the pathway between exposure to maternal smoking (MS) during pregnancy and gestational age (GA) and birth weight of the baby at birth.

methodsHDMAX2 combines latent factor regression models for epigenome-wide association studies with

resultsHDMAX2 demonstrated increased power in comparison with state-of-the-art multidimensional mediation methods and identified several AMRs not identified in previous mediation analyses of exposure to MS on birth weight and GA. The results provided evidence for a polygenic architecture of the mediation pathway with a posterior estimate of the overall indirect effect of CpGs and AMRs equal to DISCUSSION: HDMAX2 outperformed existing approaches and revealed an unsuspected complexity of the potential causal relationships between exposure to MS and birth weight at the epigenome-wide level. HDMAX2 is applicable to a wide range of tissues and omic layers. https://doi.org/10.1289/EHP11559.

Indexed as

DNA MethylationPlacentaBirth WeightFemaleHumansInfant, NewbornMaternal ExposureParturitionPregnancySmoking

Identifiers

PMID37058433
PMCPMC10104171

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.