Evidence map›Paper›PMID 37057992›Full record

ArticleJournal of the American Chemical Society2023

Expanding Extender Substrate Selection for Unnatural Polyketide Biosynthesis by Acyltransferase Domain Exchange within a Modular Polyketide Synthase.

Elias Englund, Matthias Schmidt, Alberto A Nava, Anna Lechner, Kai Deng, Renee Jocic, Yingxin Lin, Jacob Roberts, Veronica T Benites, Ramu Kakumanu and 10 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
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  12. EngineeringMetabolic engineering communications · 2025
    Article
  13. Review
  14. Review
  15. Article
  16. Review
  17. Article
  18. Evolution-guided engineering ofScience (New York, N.Y.) · 2024
    Article
  19. Article
  20. Current State-of-the-Art Toward Chemoenzymatic Synthesis of Polyketide Natural Products.Chembiochem : a European journal of chemical biology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 5 institutions in 6 countries.

Elias EnglundJoint BioEnergy Institute, Emeryville, California 94608, United States.ORCID 0000-0002-0190-5659
Matthias SchmidtJoint BioEnergy Institute, Emeryville, California 94608, United States.
Alberto A NavaBiological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States.ORCID 0000-0002-0172-4145
Anna LechnerDepartment of Chemical and Biomolecular Engineering, University of California, Berkeley, California 94720, United States.
Kai DengJoint BioEnergy Institute, Emeryville, California 94608, United States.
Renee JocicJoint BioEnergy Institute, Emeryville, California 94608, United States.
Yingxin LinDepartment of Molecular and Cell Biology, University of California, Berkeley, California 94720, United States.
Jacob RobertsBiological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States.
Veronica T BenitesJoint BioEnergy Institute, Emeryville, California 94608, United States.
Ramu KakumanuJoint BioEnergy Institute, Emeryville, California 94608, United States.
Jennifer W GinJoint BioEnergy Institute, Emeryville, California 94608, United States.
Yan ChenJoint BioEnergy Institute, Emeryville, California 94608, United States.
Yuzhong LiuDepartment of Chemical and Biomolecular Engineering, University of California, Berkeley, California 94720, United States.
Christopher J PetzoldJoint BioEnergy Institute, Emeryville, California 94608, United States.ORCID 0000-0002-8270-5228
Edward E K BaidooJoint BioEnergy Institute, Emeryville, California 94608, United States.
Trent R NorthenJoint BioEnergy Institute, Emeryville, California 94608, United States.ORCID 0000-0001-8404-3259
Paul D AdamsJoint BioEnergy Institute, Emeryville, California 94608, United States.
Leonard KatzJoint BioEnergy Institute, Emeryville, California 94608, United States.
Satoshi YuzawaJoint BioEnergy Institute, Emeryville, California 94608, United States.ORCID 0000-0001-8358-2787
Jay D KeaslingJoint BioEnergy Institute, Emeryville, California 94608, United States.ORCID 0000-0003-4170-6088
Lawrence Berkeley National Laboratory · USUniversity of California, Berkeley · USJoint BioEnergy Institute · USSandia National Laboratories California · USScience for Life Laboratory · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Modular polyketide synthases (PKSs) are polymerases that employ α-carboxyacyl-CoAs as extender substrates. This enzyme family contains several catalytic modules, where each module is responsible for a single round of polyketide chain extension. Although PKS modules typically use malonyl-CoA or methylmalonyl-CoA for chain elongation, many other malonyl-CoA analogues are used to diversify polyketide structures in nature. Previously, we developed a method to alter an extension substrate of a given module by exchanging an acyltransferase (AT) domain while maintaining protein folding. Here, we report

Indexed as

PolyketidesPolyketide SynthasesAcyltransferasesCatalytic DomainSubstrate SpecificityAcyltransferasesPolyketidesPolyketide Synthases

Identifiers

PMID37057992
PMCPMC10141241
OpenAlexW4365484933

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.