Evidence map›Paper›PMID 37055812›Full record

ArticlePorcine health management2023

In-silico characterization of the relationship between the Porcine reproductive and respiratory syndrome virus prevalence at the piglet and litter levels in a farrowing room.

Onyekachukwu H Osemeke, Eduardo de Freitas Costa, Vinicius Weide, Swaminathan Jayaraman, Gustavo S Silva, Daniel C L Linhares

Open access · goldAbstract read
In one paragraph

Article in Porcine health management, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 55% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Onyekachukwu H OsemekeVeterinary Diagnostic and Production Animal Medicine, College of Veterinary Medicine, Iowa State University, 2422 Lloyd, 1809 S Riverside Dr, Ames, IA, 50011-3619, USA. oosemeke@iastate.edu.
Eduardo de Freitas CostaDepartment of Epidemiology, Bioinformatics, and Animal Models, Wageningen Bioveterinary Research, Lelystad, The Netherlands.
Vinicius WeideInstituto Federal de Educação, Ciência e Tecnologia do Rio Grande do Sul, Farroupilha, RS, Brazil.
Swaminathan JayaramanVeterinary Diagnostic and Production Animal Medicine, College of Veterinary Medicine, Iowa State University, 2422 Lloyd, 1809 S Riverside Dr, Ames, IA, 50011-3619, USA.
Gustavo S SilvaVeterinary Diagnostic and Production Animal Medicine, College of Veterinary Medicine, Iowa State University, 2422 Lloyd, 1809 S Riverside Dr, Ames, IA, 50011-3619, USA.
Daniel C L LinharesVeterinary Diagnostic and Production Animal Medicine, College of Veterinary Medicine, Iowa State University, 2422 Lloyd, 1809 S Riverside Dr, Ames, IA, 50011-3619, USA.
Iowa State University · USInstituto Federal Farroupilha · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFamily oral fluids (FOF) sampling has been described as a sampling technique where a rope is exposed to sows and respective suckling litters and thereafter wrung to obtain fluids. PCR-based testing of FOF reveals presence of PRRS virus RNA only at the litter level, as opposed to conventional individual-animal-based sampling methods that demonstrate PRRSV RNA at the piglet level. The relationship between the PRRSV prevalence at the individual piglet level and at the litter level in a farrowing room has not been previously characterized. Using Monte Carlo simulations and data from a previous study, the relationship between the proportion of PRRSV-positive (viremic) pigs in the farrowing room, the proportion of litters in the farrowing room with at least one viremic pig, and the likely proportion of litters to be positive by a FOF RT-rtPCR test in a farrowing room was characterized, taking into account the spatial distribution (homogeneity) of viremic pigs within farrowing rooms.

resultsThere was a linear relationship between piglet-level- and litter-level prevalence, where the latter was always larger than the former. When the piglet-level prevalence was 1%, 5%, 10%, 20%, and 50%, the true-litter level prevalence was 5.36%, 8.93%, 14.29%, 23.21%, and 53.57%, respectively. The corresponding apparent-litter prevalence by FOF was 2.06%, 6.48%, 11.25%, 21.60%, and 51.56%, respectively.

conclusionThis study provides matching prevalence estimates to help guide sample size calculations. It also provides a framework to estimate the likely proportion of viremic pigs, given the PRRSV RT-rtPCR positivity rate of FOF samples submitted from a farrowing room.

Indexed as

ClusteringFOFPigletsPrevalencePRRSVSimulations

Identifiers

PMID37055812
PMCPMC10099699
OpenAlexW4365447519

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.