Evidence map›Paper›PMID 37055595›Full record

ArticleFunctional & integrative genomics2023

Transcriptome analysis reveals the regulatory effects of Bacillus amyloliquefaciens and Bacillus pumilus on immune and digestive related genes in the spleen of weanling black goats.

Nanchi Zhang, Juan Li, Li Wang, Yong Wei, Quzhe Emu, Feng Xu, Lin Zhang

Abstract read
PubMed Publisher
In one paragraph

Article in Functional & integrative genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 citations in OpenAlex.

  1. Article
  2. Animal nutrition (Zhongguo xu mu shou yi xue hui) · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Nanchi ZhangKey Laboratory of Qinghai-Tibetan Plateau Animal Genetic Resource Reservation and Utilization of Ministry of Education, Chengdu, 610041, China.ORCID http://orcid.org/0000-0002-9499-1970
Juan LiKey Laboratory of Qinghai-Tibetan Plateau Animal Genetic Resource Reservation and Utilization of Ministry of Education, Chengdu, 610041, China.ORCID http://orcid.org/0000-0002-3370-8094
Li WangKey Laboratory of Qinghai-Tibetan Plateau Animal Genetic Resource Reservation and Utilization of Ministry of Education, Chengdu, 610041, China. qinxin916@aliyun.com.ORCID http://orcid.org/0000-0001-8267-9309
Yong WeiAnimal Genetics and Breeding Key Laboratory of Sichuan Province, Sichuan Animal Sciences Academy, No.7, Niusha Road, Chengdu, 610066, China. veishangyan@163.com.ORCID http://orcid.org/0000-0003-3019-2173
Quzhe EmuAnimal Genetics and Breeding Key Laboratory of Sichuan Province, Sichuan Animal Sciences Academy, No.7, Niusha Road, Chengdu, 610066, China.
Feng XuAnimal Genetics and Breeding Key Laboratory of Sichuan Province, Sichuan Animal Sciences Academy, No.7, Niusha Road, Chengdu, 610066, China.
Lin ZhangAnimal Genetics and Breeding Key Laboratory of Sichuan Province, Sichuan Animal Sciences Academy, No.7, Niusha Road, Chengdu, 610066, China.
Sichuan Animal Science Academy · CNState Ethnic Affairs Commission · CN

Funding

Epidemic Prevention Post of Sichuan Meat Sheep Innovation Team sccxtd-2020-14Fundamental Research Funds for the Central Universities, Southwest Minzu University 2023NYXXS005Sichuan Science and Technology Program 2021YFN007
6 · The paper itself

Abstract

The aim of the present study was to evaluate the effects of Bacillus amyloliquefaciens fsznc-06 and Bacillus pumilus fsznc-09 on the expressions of spleen genes in weanling Jintang black goats. Bacillus amyloliquefaciens fsznc-06 (BA-treated group) and Bacillus pumilus fsznc-09 (BP-treated group) were directly fed to goats, and the spleens were harvested for transcriptome analysis. The KEGG pathway analysis showed that the differentially expressed genes (DEGs) in BA-treated vs CON group were mainly involved in digestive system and immune system, while those in BP-treated vs CON group were mainly involved in immune system, and those in BA-treated vs BP-treated group were mainly involved in digestive system. In conclusion, Bacillus amyloliquefaciens fsznc-06 might promote the expressions of genes related to immune system and digestive system, reduce the expressions of disease genes related to digestive system and might promote mutual accommodation of some immune genes in weanling black goat. Bacillus pumilus fsznc-09 might promote the expressions of genes related to immune system and mutual accommodation of some immune genes in weanling black goat. Bacillus amyloliquefaciens fsznc-06 has advantages over Bacillus pumilus fsznc-09 in promoting the expressions of genes related to digestive system and mutual accommodation of some immune genes.

Indexed as

Bacillus amyloliquefaciensBacillus pumilusAnimalsGene Expression ProfilingGoatsSpleenTranscriptomeBacillus amyloliquefaciensBacillus pumilusJintang black goatSpleenTranscriptome analysis

Identifiers

PMID37055595
OpenAlexW4365457474

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.