Evidence map›Paper›PMID 37053313›Full record

ArticleScience (New York, N.Y.)2023

The origins and functional effects of postzygotic mutations throughout the human life span.

Nicole B Rockweiler, Avinash Ramu, Liina Nagirnaja, Wing H Wong, Michiel J Noordam, Casey W Drubin, Ni Huang, Brian Miller, Ellen Z Todres, Katinka A Vigh-Conrad and 5 more

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 28 citations in OpenAlex.

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  18. Building the brain mosaic: an expanded view.Trends in genetics : TIG · 2024
    Review
  19. The Evolutionary Interplay of Somatic and Germline Mutation Rates.Annual review of biomedical data science · 2024
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Nicole B RockweilerDepartment of Genetics, Washington University School of Medicine, St. Louis, MO 63110, USA.ORCID 0000-0001-5249-5357
Avinash RamuDepartment of Genetics, Washington University School of Medicine, St. Louis, MO 63110, USA.ORCID 0000-0003-3799-809X
Liina NagirnajaDivision of Genetics, Oregon National Primate Research Center, Oregon Health & Science University, Beaverton, OR 97006, USA.ORCID 0000-0003-1948-2495
Wing H WongDepartment of Pediatrics, Division of Hematology and Oncology, Washington University School of Medicine, St. Louis, MO 63110, USA.ORCID 0000-0003-2494-1721
Michiel J NoordamDepartment of Genetics, Washington University School of Medicine, St. Louis, MO 63110, USA.
Casey W DrubinDepartment of Genetics, Washington University School of Medicine, St. Louis, MO 63110, USA.ORCID 0000-0003-0815-2853
Ni HuangDepartment of Genetics, Washington University School of Medicine, St. Louis, MO 63110, USA.ORCID 0000-0001-8849-038X
Brian MillerDivision of Genetics, Oregon National Primate Research Center, Oregon Health & Science University, Beaverton, OR 97006, USA.ORCID 0000-0002-3053-2302
Ellen Z TodresBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.ORCID 0000-0001-9289-4432
Katinka A Vigh-ConradDivision of Genetics, Oregon National Primate Research Center, Oregon Health & Science University, Beaverton, OR 97006, USA.ORCID 0000-0002-8222-7537
Antonino ZitoDepartment of Twin Research and Genetic Epidemiology, King's College London, London SE1 7EH, UK.ORCID 0000-0003-1931-984X
Kerrin S SmallDepartment of Twin Research and Genetic Epidemiology, King's College London, London SE1 7EH, UK.ORCID 0000-0003-4566-0005
Kristin G ArdlieBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.ORCID 0000-0003-4272-6283
Barak A CohenDepartment of Genetics, Washington University School of Medicine, St. Louis, MO 63110, USA.ORCID 0000-0002-3350-2715
Donald F ConradDepartment of Genetics, Washington University School of Medicine, St. Louis, MO 63110, USA.ORCID 0000-0003-3828-8970
Washington University in St. Louis · USOregon National Primate Research Center · USBroad Institute · USKing's College London · GB

Funding

Washington University Center for Cellular ImagingP30CA091842 · NCI · WASHINGTON UNIVERSITY · PI AIMEE S JAMES · 2001 to 2026
$128.0M
Multispecies NHP dGTEx Research CenterU24HG012483 · NHGRI · OREGON HEALTH & SCIENCE UNIVERSITY · PI KRISTIN ARDLIE, DONALD F. CONRAD · 2022 to 2026
$17.0M
INSTITUTIONAL TRAINING GRANT IN GENOMIC SCIENCET32HG000045 · NHGRI · WASHINGTON UNIVERSITY · PI MICHAEL R BRENT, Barak A Cohen · 1997 to 2026
$8.4M
PROMOTERSR01GM092910 · NIGMS · WASHINGTON UNIVERSITY · PI Barak A Cohen · 2011 to 2026
$6.6M
GENOMICS OF SPERMATOGENIC IMPAIRMENTR01HD078641 · NICHD · WASHINGTON UNIVERSITY · PI Kenneth Ivan Aston, DONALD F. CONRAD · 2014 to 2026
$6.3M
A portal and integrative collaborative analysis platform for GTExU41HG009494 · NHGRI · BROAD INSTITUTE, INC. · PI ARDLIE, KRISTIN · 2017 to 2021
$5.2M
Analysis of de novo mutation from sequencing of related individuals and cellsR01HG007178 · NHGRI · WASHINGTON UNIVERSITY · PI CONRAD, DONALD F. · 2014 to 2018
$2.6M
MODELING THE EFFECTS OF STRUCTURAL VARIATION IN GTEX DATA AND MENDELIAN DISEASER01MH101810 · NIMH · WASHINGTON UNIVERSITY · PI CONRAD, DONALD F. · 2013 to 2016
$1.3M
Medical Research Council MR/M004422/1Medical Research Council MR/R023131/1NCI NIH HHS P30 CA091842NHGRI NIH HHS R01 HG007178NHGRI NIH HHS T32 HG000045NHGRI NIH HHS U24 HG012483NHGRI NIH HHS U41 HG009494NICHD NIH HHS R01 HD078641NIGMS NIH HHS R01 GM092910NIMH NIH HHS R01 MH101810Wellcome Trust
6 · The paper itself

Abstract

Postzygotic mutations (PZMs) begin to accrue in the human genome immediately after fertilization, but how and when PZMs affect development and lifetime health remain unclear. To study the origins and functional consequences of PZMs, we generated a multitissue atlas of PZMs spanning 54 tissue and cell types from 948 donors. Nearly half the variation in mutation burden among tissue samples can be explained by measured technical and biological effects, and 9% can be attributed to donor-specific effects. Through phylogenetic reconstruction of PZMs, we found that their type and predicted functional impact vary during prenatal development, across tissues, and through the germ cell life cycle. Thus, methods for interpreting effects across the body and the life span are needed to fully understand the consequences of genetic variants.

Indexed as

DNA Mutational AnalysisLongevityZygoteFemaleHumansMutationPhylogenyRNA-Seq

Identifiers

PMID37053313
PMCPMC11246725
OpenAlexW4365445785

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.