Evidence map›Paper›PMID 37050181›Full record

ArticlePlants (Basel, Switzerland)2023

Transcriptional Profile of Soybean Seeds with Contrasting Seed Coat Color.

João M Kafer, Mayla D C Molinari, Fernando A Henning, Alessandra Koltun, Viviani V Marques, Silvana R R Marin, Alexandre L Nepomuceno, Liliane M Mertz-Henning

Abstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
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  6. Dissecting the cellular architecture and genetic circuitry of the soybean seed.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

João M KaferBiotechnology Department, Londrina State University, Londrina 86057-970, PR, Brazil.
Mayla D C MolinariArthur Bernardes Foundation, Embrapa Soja, Londrina 86085-981, PR, Brazil.
Fernando A HenningEmbrapa Soja, Londrina 86085-981, PR, Brazil.
Alessandra KoltunAgronomy Department, State University of Maringá, Maringá 87020-900, PR, Brazil.ORCID 0000-0001-8889-5264
Viviani V MarquesArthur Bernardes Foundation, Embrapa Soja, Londrina 86085-981, PR, Brazil.ORCID 0000-0003-4770-5174
Silvana R R MarinEmbrapa Soja, Londrina 86085-981, PR, Brazil.
Alexandre L NepomucenoEmbrapa Soja, Londrina 86085-981, PR, Brazil.
Liliane M Mertz-HenningEmbrapa Soja, Londrina 86085-981, PR, Brazil.ORCID 0000-0001-7622-0649

Funding

National Council for Scientific and Technological Development 409349/2021-6
6 · The paper itself

Abstract

Soybean is the primary source of vegetable protein and is used for various purposes, mainly to feed animals. This crop can have diverse seed coat colors, varying from yellow, black, brown, and green to bicolor. Black seed coat cultivars have already been assigned as favorable for both seed and grain production. Thus, this work aimed to identify genes associated with soybean seed quality by comparing the transcriptomes of soybean seeds with contrasting seed coat colors. The results from RNA-seq analyses were validated with real-time PCR using the cultivar BRS 715A (black seed coat) and the cultivars BRS 413 RR and DM 6563 IPRO (yellow seed coat). We found 318 genes differentially expressed in all cultivars (freshly harvested seeds and seeds stored in cold chamber). From the in silico analysis of the transcriptomes, the following genes were selected and validated with RT-qPCR:

Indexed as

Glycine maxligninRNA-Seqsoybean storage

Identifiers

PMID37050181
PMCPMC10097363

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.