Evidence map›Paper›PMID 37048319›Full record

ArticleFoods (Basel, Switzerland)2023

A Machine Learning Method to Identify Umami Peptide Sequences by Using Multiplicative LSTM Embedded Features.

Jici Jiang, Jiayu Li, Junxian Li, Hongdi Pei, Mingxin Li, Quan Zou, Zhibin Lv

Abstract read
In one paragraph

Article in Foods (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jici JiangCollege of Biomedical Engineering, Sichuan University, Chengdu 610065, China.
Jiayu LiCollege of Life Science, Sichuan University, Chengdu 610065, China.
Junxian LiCollege of Biomedical Engineering, Sichuan University, Chengdu 610065, China.
Hongdi PeiCollege of Biomedical Engineering, Sichuan University, Chengdu 610065, China.
Mingxin LiCollege of Biomedical Engineering, Sichuan University, Chengdu 610065, China.
Quan ZouInstitute of Fundamental and Frontier Sciences, University of Electronic Science and Technology of China, Chengdu 610054, China.ORCID 0000-0001-6406-1142
Zhibin LvCollege of Biomedical Engineering, Sichuan University, Chengdu 610065, China.ORCID 0000-0001-5390-7616

Funding

Fundamental Research Funds for the Central Universities of Sichuan University No. YJ2021104Municipal Government of Quzhou No. 2022D040National Natural Science Foundation of China No. 62001090, No. 62250028, No. 62131004Sichuan Provincial Science Fund for Distinguished Young Scholars No. 2021JDJQ0025
6 · The paper itself

Abstract

Umami peptides enhance the umami taste of food and have good food processing properties, nutritional value, and numerous potential applications. Wet testing for the identification of umami peptides is a time-consuming and expensive process. Here, we report the iUmami-DRLF that uses a logistic regression (LR) method solely based on the deep learning pre-trained neural network feature extraction method, unified representation (UniRep based on multiplicative LSTM), for feature extraction from the peptide sequences. The findings demonstrate that deep learning representation learning significantly enhanced the capability of models in identifying umami peptides and predictive precision solely based on peptide sequence information. The newly validated taste sequences were also used to test the iUmami-DRLF and other predictors, and the result indicates that the iUmami-DRLF has better robustness and accuracy and remains valid at higher probability thresholds. The iUmami-DRLF method can aid further studies on enhancing the umami flavor of food for satisfying the need for an umami-flavored diet.

Indexed as

ANOVAdeep representation learninglight gradient boostingmultiplicative LSTMmutual informationSMOTEumami peptide

Identifiers

PMID37048319
PMCPMC10094688

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.