Evidence map›Paper›PMID 37048143›Full record

ArticleCells2023

High-Throughput Transcriptomics of

Archana D Siddam, Matthieu Duot, Sarah Y Coomson, Deepti Anand, Sandeep Aryal, Bailey A T Weatherbee, Yann Audic, Luc Paillard, Salil A Lachke

Open access · goldAbstract read
In one paragraph

Article in Cells, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 2 pooled it
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 2 syntheses or guidelines pooled it, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Archana D SiddamDepartment of Biological Sciences, University of Delaware, Newark, DE 19716, USA.
Matthieu DuotDepartment of Biological Sciences, University of Delaware, Newark, DE 19716, USA.
Sarah Y CoomsonDepartment of Biological Sciences, University of Delaware, Newark, DE 19716, USA.
Deepti AnandDepartment of Biological Sciences, University of Delaware, Newark, DE 19716, USA.
Sandeep AryalDepartment of Biological Sciences, University of Delaware, Newark, DE 19716, USA.ORCID 0000-0002-1674-4552
Bailey A T WeatherbeeDepartment of Biological Sciences, University of Delaware, Newark, DE 19716, USA.ORCID 0000-0002-6825-6278
Yann AudicCNRS, IGDR (Institut de Génétique et Développement de Rennes), Univ. Rennes, UMR 6290, Rennes, F-35000 Rennes, France.ORCID 0000-0003-2498-9792
Luc PaillardCNRS, IGDR (Institut de Génétique et Développement de Rennes), Univ. Rennes, UMR 6290, Rennes, F-35000 Rennes, France.ORCID 0000-0002-9290-7616
Salil A LachkeDepartment of Biological Sciences, University of Delaware, Newark, DE 19716, USA.ORCID 0000-0001-8845-010X
University of Delaware · USCentre National de la Recherche Scientifique · FR

Funding

POST TRANSCRIPTIONAL CONTROL OF GENE EXPRESSION IN THE LENS (LENS GENE EXPRESSIONR01EY021505 · NEI · WASHINGTON UNIVERSITY · PI LACHKE, SALIL · 2011 to 2024
$5.3M
RNA-binding proteins in early eye development.R01EY029770 · NEI · UNIVERSITY OF DELAWARE · PI LACHKE, SALIL · 2019 to 2023
$1.7M
NEI NIH HHS R01 EY021505NEI NIH HHS R01 EY029770
6 · The paper itself

Abstract

Defects in the development of the ocular lens can cause congenital cataracts. To understand the various etiologies of congenital cataracts, it is important to characterize the genes linked to this developmental defect and to define their downstream pathways that are relevant to lens biology and pathology. Deficiency or alteration of several RNA-binding proteins, including the conserved RBP Celf1 (CUGBP Elav-like family member 1), has been described to cause lens defects and early onset cataracts in animal models and/or humans. Celf1 is involved in various aspects of post-transcriptional gene expression control, including regulation of mRNA stability/decay, alternative splicing and translation.

Indexed as

CataractCELF1 ProteinLens, CrystallineAnimalsHumansMiceMice, KnockoutRNATranscriptomeCELF1 ProteinCELF1 protein, mouseRNAcataractsCugbp1developmenteyelensmicroarrayspost-transcriptional controlRNA-binding proteinRNA-sequencingtranscriptome

Identifiers

PMID37048143
PMCPMC10093462
OpenAlexW4362587034

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.