Evidence map›Paper›PMID 37047654›Full record

ArticleInternational journal of molecular sciences2023

A Machine Learning Model to Predict Survival and Therapeutic Responses in Multiple Myeloma.

Liang Ren, Bei Xu, Jiadai Xu, Jing Li, Jifeng Jiang, Yuhong Ren, Peng Liu

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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  12. Risk Factors and Predictive Model for Disseminated Intravascular Coagulation in Patients with Multiple Myeloma.Clinical and applied thrombosis/hemostasis : official journal of the International Academy of Clinical and Applied Thrombosis/Hemostasis
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Liang RenDepartment of Hematology, Zhongshan Hospital, Fudan University, Shanghai 200032, China.ORCID 0000-0003-0678-0987
Bei XuDepartment of Hematology, Zhongshan Hospital, Fudan University, Shanghai 200032, China.
Jiadai XuDepartment of Hematology, Zhongshan Hospital, Fudan University, Shanghai 200032, China.
Jing LiDepartment of Hematology, Zhongshan Hospital, Fudan University, Shanghai 200032, China.
Jifeng JiangDepartment of Hematology, Zhongshan Hospital, Fudan University, Shanghai 200032, China.
Yuhong RenDepartment of Hematology, Zhongshan Hospital, Fudan University, Shanghai 200032, China.ORCID 0000-0003-0330-4125
Peng LiuDepartment of Hematology, Zhongshan Hospital, Fudan University, Shanghai 200032, China.
Sun Yat-sen University · CN

Funding

Shanghai Natural Science Foundation 22ZR1411400
6 · The paper itself

Abstract

Multiple myeloma (MM) is a highly heterogeneous hematologic tumor. Ubiquitin proteasome pathways (UPP) play a vital role in its initiation and development. We used cox regression analysis and least absolute shrinkage and selector operation (LASSO) to select ubiquitin proteasome pathway associated genes (UPPGs) correlated with the overall survival (OS) of MM patients in a Gene Expression Omnibus (GEO) dataset, and we formed this into ubiquitin proteasome pathway risk score (UPPRS). The association between clinical outcomes and responses triggered by proteasome inhibitors (PIs) and UPPRS were evaluated. MMRF CoMMpass was used for validation. We applied machine learning algorithms to MM clinical and UPPRS in the whole cohort to make a prognostic nomogram. Single-cell data and vitro experiments were performed to unravel the mechanism and functions of UPPRS. UPPRS consisting of 9 genes showed a strong ability to predict OS in MM patients. Additionally, UPPRS can be used to sort out the patients who would gain more benefits from PIs. A machine learning model incorporating UPPRS and International Staging System (ISS) improved survival prediction in both datasets compared to the revisions of ISS. At the single-cell level, high-risk UPPRS myeloma cells exhibited increased cell adhesion. Targeted UPPGs effectively inhibited myeloma cells in vitro. The UPP genes risk score is a helpful tool for risk stratification in MM patients, particularly those treated with PIs.

Indexed as

Multiple MyelomaHumansMachine LearningProteasome Endopeptidase ComplexProteasome InhibitorsUbiquitinsProteasome Endopeptidase ComplexProteasome InhibitorsUbiquitinsmachine learningmultiple myelomaproteasome inhibitorssingle-cell RNA-sequencingubiquitin proteasome pathway

Identifiers

PMID37047654
PMCPMC10095137
OpenAlexW4362559691

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.